Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUP43Q8NFH3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.34■□□□□ 0.69
NUP43Q8NFH3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP43Q8NFH3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.34■□□□□ 0.69
NUP43Q8NFH3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUP43Q8NFH3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP43Q8NFH3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP43Q8NFH3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 AL157384.1-201ENST00000445995 2473 ntBASIC19.32■□□□□ 0.68
NUP43Q8NFH3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP43Q8NFH3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NUP43Q8NFH3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.3■□□□□ 0.68
NUP43Q8NFH3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.3■□□□□ 0.68
NUP43Q8NFH3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP43Q8NFH3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms