Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SREK1IP1Q8N9Q2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SREK1IP1Q8N9Q2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.16■□□□□ 0.34
SREK1IP1Q8N9Q2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.16■□□□□ 0.34
SREK1IP1Q8N9Q2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SREK1IP1Q8N9Q2 AL032819.2-201ENST00000624543 2162 ntBASIC17.16■□□□□ 0.34
SREK1IP1Q8N9Q2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SREK1IP1Q8N9Q2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SREK1IP1Q8N9Q2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.16■□□□□ 0.34
SREK1IP1Q8N9Q2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.15■□□□□ 0.34
SREK1IP1Q8N9Q2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.14■□□□□ 0.34
SREK1IP1Q8N9Q2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
SREK1IP1Q8N9Q2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 GABARAPL3-202ENST00000624044 1851 ntBASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 RPS2P35-201ENST00000443417 897 ntBASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 DUX4L11-201ENST00000611504 1267 ntBASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 DUX4L12-201ENST00000614593 1267 ntBASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 DUX4L14-201ENST00000621227 1267 ntBASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREK1IP1Q8N9Q2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 AC148477.6-201ENST00000623746 465 ntBASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 AL049812.1-201ENST00000432563 2267 ntBASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREK1IP1Q8N9Q2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 AC112907.3-201ENST00000577781 2400 ntBASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREK1IP1Q8N9Q2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SREK1IP1Q8N9Q2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
SREK1IP1Q8N9Q2 PCDHB18P-201ENST00000524813 2368 ntBASIC17.11■□□□□ 0.33
SREK1IP1Q8N9Q2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SREK1IP1Q8N9Q2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SREK1IP1Q8N9Q2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SREK1IP1Q8N9Q2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SREK1IP1Q8N9Q2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SREK1IP1Q8N9Q2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms