Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ARHGEF28Q8N1W1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ARHGEF28Q8N1W1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC28.91■■■□□ 2.22
ARHGEF28Q8N1W1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
ARHGEF28Q8N1W1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC28.91■■■□□ 2.22
ARHGEF28Q8N1W1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC28.91■■■□□ 2.22
ARHGEF28Q8N1W1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC28.91■■■□□ 2.22
ARHGEF28Q8N1W1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
ARHGEF28Q8N1W1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
ARHGEF28Q8N1W1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
ARHGEF28Q8N1W1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.21
ARHGEF28Q8N1W1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC28.89■■■□□ 2.21
ARHGEF28Q8N1W1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
ARHGEF28Q8N1W1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
ARHGEF28Q8N1W1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC28.89■■■□□ 2.21
ARHGEF28Q8N1W1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
ARHGEF28Q8N1W1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 HES2-205ENST00000487437 968 ntTSL 3 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ARHGEF28Q8N1W1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC28.87■■■□□ 2.21
ARHGEF28Q8N1W1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC28.86■■■□□ 2.21
ARHGEF28Q8N1W1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC28.85■■■□□ 2.21
ARHGEF28Q8N1W1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
ARHGEF28Q8N1W1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
ARHGEF28Q8N1W1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ARHGEF28Q8N1W1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC28.85■■■□□ 2.21
ARHGEF28Q8N1W1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ARHGEF28Q8N1W1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ARHGEF28Q8N1W1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC28.85■■■□□ 2.21
ARHGEF28Q8N1W1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ARHGEF28Q8N1W1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
ARHGEF28Q8N1W1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
ARHGEF28Q8N1W1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC28.84■■■□□ 2.21
ARHGEF28Q8N1W1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC28.84■■■□□ 2.21
ARHGEF28Q8N1W1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
ARHGEF28Q8N1W1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
ARHGEF28Q8N1W1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC28.84■■■□□ 2.21
ARHGEF28Q8N1W1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC28.84■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms