Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 MIR4767-201ENST00000582827 78 ntBASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 AC105233.4-201ENST00000642045 216 ntBASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01561Q8N1V8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 POU5F1P4-201ENST00000413175 1085 ntBASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 AC131281.2-201ENST00000520478 145 ntBASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 FP700111.2-201ENST00000619190 1892 ntBASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01561Q8N1V8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.83□□□□□ -0.19
LINC01561Q8N1V8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01561Q8N1V8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01561Q8N1V8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
LINC01561Q8N1V8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms