Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTTNQ86VV8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTTNQ86VV8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RTTNQ86VV8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTTNQ86VV8 NCF1B-203ENST00000435988 1254 ntBASIC18.2■□□□□ 0.5
RTTNQ86VV8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.2■□□□□ 0.5
RTTNQ86VV8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.2■□□□□ 0.5
RTTNQ86VV8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTTNQ86VV8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.2■□□□□ 0.5
RTTNQ86VV8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.2■□□□□ 0.5
RTTNQ86VV8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 CROCCP5-201ENST00000436658 830 ntBASIC18.19■□□□□ 0.5
RTTNQ86VV8 AC010141.2-201ENST00000452426 721 ntBASIC18.19■□□□□ 0.5
RTTNQ86VV8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.19■□□□□ 0.5
RTTNQ86VV8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 AC006970.2-201ENST00000450065 779 ntBASIC18.19■□□□□ 0.5
RTTNQ86VV8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 DUX4L16-201ENST00000555130 1264 ntBASIC18.19■□□□□ 0.5
RTTNQ86VV8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 AP001160.3-201ENST00000601484 763 ntBASIC18.19■□□□□ 0.5
RTTNQ86VV8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTTNQ86VV8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.19■□□□□ 0.5
RTTNQ86VV8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTTNQ86VV8 GPX1P1-201ENST00000388829 606 ntBASIC18.18■□□□□ 0.5
RTTNQ86VV8 MFSD11-216ENST00000590393 1141 ntBASIC18.18■□□□□ 0.5
RTTNQ86VV8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RTTNQ86VV8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.18■□□□□ 0.5
RTTNQ86VV8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTTNQ86VV8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTTNQ86VV8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTTNQ86VV8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RTTNQ86VV8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTTNQ86VV8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTTNQ86VV8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTTNQ86VV8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.18■□□□□ 0.5
RTTNQ86VV8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.18■□□□□ 0.5
RTTNQ86VV8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RTTNQ86VV8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.17■□□□□ 0.5
RTTNQ86VV8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.17■□□□□ 0.5
RTTNQ86VV8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.17■□□□□ 0.5
RTTNQ86VV8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.17■□□□□ 0.5
RTTNQ86VV8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RTTNQ86VV8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTTNQ86VV8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RTTNQ86VV8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTTNQ86VV8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTTNQ86VV8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTTNQ86VV8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTTNQ86VV8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.16■□□□□ 0.5
RTTNQ86VV8 AC008175.2-201ENST00000612840 297 ntBASIC18.16■□□□□ 0.5
RTTNQ86VV8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTTNQ86VV8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.16■□□□□ 0.5
RTTNQ86VV8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 MIR663A-201ENST00000385250 93 ntBASIC18.15■□□□□ 0.5
RTTNQ86VV8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 AC092667.1-201ENST00000434301 2586 ntBASIC18.15■□□□□ 0.5
RTTNQ86VV8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms