Protein–RNA interactions for Protein: Q86VQ0

LCA5, Lebercilin, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5Q86VQ0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.57■□□□□ 0.88
LCA5Q86VQ0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCA5Q86VQ0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCA5Q86VQ0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCA5Q86VQ0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.56■□□□□ 0.88
LCA5Q86VQ0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 EEF1DP3-203ENST00000566025 782 ntBASIC20.55■□□□□ 0.88
LCA5Q86VQ0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LCA5Q86VQ0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 AC099791.1-201ENST00000416440 715 ntBASIC20.54■□□□□ 0.88
LCA5Q86VQ0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 AC020907.5-201ENST00000624372 1936 ntBASIC20.54■□□□□ 0.88
LCA5Q86VQ0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCA5Q86VQ0 AC011484.1-201ENST00000377652 1995 ntBASIC20.54■□□□□ 0.88
LCA5Q86VQ0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 MIR572-201ENST00000384983 95 ntBASIC20.53■□□□□ 0.88
LCA5Q86VQ0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 AC008764.7-201ENST00000593779 1081 ntBASIC20.53■□□□□ 0.88
LCA5Q86VQ0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.53■□□□□ 0.88
LCA5Q86VQ0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCA5Q86VQ0 TSPY26P-201ENST00000476365 1326 ntBASIC20.53■□□□□ 0.88
LCA5Q86VQ0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCA5Q86VQ0 AC027702.1-201ENST00000563810 1770 ntBASIC20.52■□□□□ 0.88
LCA5Q86VQ0 AP004607.4-201ENST00000530158 1459 ntBASIC20.52■□□□□ 0.88
LCA5Q86VQ0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCA5Q86VQ0 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.52■□□□□ 0.88
LCA5Q86VQ0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LCA5Q86VQ0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.52■□□□□ 0.88
LCA5Q86VQ0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCA5Q86VQ0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LCA5Q86VQ0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LCA5Q86VQ0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms