Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CCDC190Q86UF4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC190Q86UF4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC190Q86UF4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC190Q86UF4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC190Q86UF4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC190Q86UF4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC190Q86UF4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
CCDC190Q86UF4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
CCDC190Q86UF4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC190Q86UF4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 AL034346.1-201ENST00000568244 1277 ntBASIC18.01■□□□□ 0.47
CCDC190Q86UF4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 MIR6722-201ENST00000617286 78 ntBASIC18.01■□□□□ 0.47
CCDC190Q86UF4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC190Q86UF4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC190Q86UF4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC190Q86UF4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC190Q86UF4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18■□□□□ 0.47
CCDC190Q86UF4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18■□□□□ 0.47
CCDC190Q86UF4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18■□□□□ 0.47
CCDC190Q86UF4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCDC190Q86UF4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18■□□□□ 0.47
CCDC190Q86UF4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC190Q86UF4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18■□□□□ 0.47
CCDC190Q86UF4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC190Q86UF4 AC129492.7-201ENST00000622992 756 ntBASIC18■□□□□ 0.47
CCDC190Q86UF4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18■□□□□ 0.47
CCDC190Q86UF4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18■□□□□ 0.47
CCDC190Q86UF4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC190Q86UF4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC190Q86UF4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18■□□□□ 0.47
CCDC190Q86UF4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC190Q86UF4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC190Q86UF4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18■□□□□ 0.47
CCDC190Q86UF4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18■□□□□ 0.47
CCDC190Q86UF4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.99■□□□□ 0.47
CCDC190Q86UF4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC190Q86UF4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms