Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF546Q86UE3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF546Q86UE3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 PVT1_1.1-201ENST00000615125 194 ntBASIC17.15■□□□□ 0.34
ZNF546Q86UE3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 AC005703.6-201ENST00000623265 1329 ntBASIC17.15■□□□□ 0.34
ZNF546Q86UE3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF546Q86UE3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.14■□□□□ 0.34
ZNF546Q86UE3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ZNF546Q86UE3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ZNF546Q86UE3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF546Q86UE3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF546Q86UE3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF546Q86UE3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF546Q86UE3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF546Q86UE3 ATP5G2P3-201ENST00000429083 425 ntBASIC17.14■□□□□ 0.33
ZNF546Q86UE3 AC010980.1-201ENST00000587192 1142 ntBASIC17.14■□□□□ 0.33
ZNF546Q86UE3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF546Q86UE3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF546Q86UE3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ZNF546Q86UE3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 AC121338.2-201ENST00000622535 1744 ntBASIC17.13■□□□□ 0.33
ZNF546Q86UE3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms