Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FAM78BQ5VT40 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FAM78BQ5VT40 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.33■□□□□ 0.21
FAM78BQ5VT40 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
FAM78BQ5VT40 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
FAM78BQ5VT40 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
FAM78BQ5VT40 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.33■□□□□ 0.21
FAM78BQ5VT40 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FAM78BQ5VT40 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FAM78BQ5VT40 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 MIR3181-201ENST00000578512 73 ntBASIC16.33■□□□□ 0.2
FAM78BQ5VT40 AC092171.4-201ENST00000609130 632 ntBASIC16.33■□□□□ 0.2
FAM78BQ5VT40 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
FAM78BQ5VT40 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FAM78BQ5VT40 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms