Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VLDLRP98155 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VLDLRP98155 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VLDLRP98155 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
VLDLRP98155 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VLDLRP98155 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
VLDLRP98155 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.28■□□□□ 0.68
VLDLRP98155 AC055733.4-201ENST00000638462 1354 ntBASIC19.28■□□□□ 0.68
VLDLRP98155 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
VLDLRP98155 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.28■□□□□ 0.68
VLDLRP98155 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VLDLRP98155 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VLDLRP98155 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.27■□□□□ 0.68
VLDLRP98155 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.27■□□□□ 0.68
VLDLRP98155 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.27■□□□□ 0.68
VLDLRP98155 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VLDLRP98155 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VLDLRP98155 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VLDLRP98155 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.27■□□□□ 0.68
VLDLRP98155 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
VLDLRP98155 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.27■□□□□ 0.68
VLDLRP98155 AC092666.2-201ENST00000613287 246 ntBASIC19.27■□□□□ 0.68
VLDLRP98155 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.27■□□□□ 0.68
VLDLRP98155 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VLDLRP98155 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VLDLRP98155 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
VLDLRP98155 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VLDLRP98155 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VLDLRP98155 AL512408.1-201ENST00000569378 2000 ntBASIC19.27■□□□□ 0.67
VLDLRP98155 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
VLDLRP98155 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.27■□□□□ 0.67
VLDLRP98155 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VLDLRP98155 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VLDLRP98155 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VLDLRP98155 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.26■□□□□ 0.67
VLDLRP98155 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VLDLRP98155 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VLDLRP98155 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VLDLRP98155 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VLDLRP98155 AC026271.2-201ENST00000428091 497 ntBASIC19.26■□□□□ 0.67
VLDLRP98155 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.26■□□□□ 0.67
VLDLRP98155 AC024257.2-201ENST00000549699 147 ntBASIC19.26■□□□□ 0.67
VLDLRP98155 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.26■□□□□ 0.67
VLDLRP98155 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VLDLRP98155 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VLDLRP98155 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VLDLRP98155 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VLDLRP98155 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.26■□□□□ 0.67
VLDLRP98155 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.25■□□□□ 0.67
VLDLRP98155 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.25■□□□□ 0.67
VLDLRP98155 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.25■□□□□ 0.67
VLDLRP98155 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 FP700111.2-201ENST00000619190 1892 ntBASIC19.25■□□□□ 0.67
VLDLRP98155 AL162377.1-201ENST00000618844 1793 ntBASIC19.25■□□□□ 0.67
VLDLRP98155 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 BX842568.3-201ENST00000418104 571 ntBASIC19.25■□□□□ 0.67
VLDLRP98155 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.25■□□□□ 0.67
VLDLRP98155 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
VLDLRP98155 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
VLDLRP98155 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.25■□□□□ 0.67
VLDLRP98155 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VLDLRP98155 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VLDLRP98155 BX005040.4-201ENST00000637145 1518 ntBASIC19.25■□□□□ 0.67
VLDLRP98155 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VLDLRP98155 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VLDLRP98155 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VLDLRP98155 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.24■□□□□ 0.67
VLDLRP98155 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VLDLRP98155 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.24■□□□□ 0.67
VLDLRP98155 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.24■□□□□ 0.67
VLDLRP98155 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.24■□□□□ 0.67
VLDLRP98155 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VLDLRP98155 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.24■□□□□ 0.67
VLDLRP98155 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.24■□□□□ 0.67
VLDLRP98155 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.24■□□□□ 0.67
VLDLRP98155 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VLDLRP98155 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VLDLRP98155 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VLDLRP98155 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VLDLRP98155 AC009237.3-201ENST00000393279 1427 ntBASIC19.24■□□□□ 0.67
VLDLRP98155 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VLDLRP98155 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VLDLRP98155 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VLDLRP98155 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VLDLRP98155 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
VLDLRP98155 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.23■□□□□ 0.67
VLDLRP98155 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VLDLRP98155 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VLDLRP98155 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VLDLRP98155 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VLDLRP98155 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.23■□□□□ 0.67
VLDLRP98155 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms