Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.28■□□□□ 0.68
RPS3AP61247 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.28■□□□□ 0.68
RPS3AP61247 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.28■□□□□ 0.68
RPS3AP61247 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.28■□□□□ 0.68
RPS3AP61247 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RPS3AP61247 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPS3AP61247 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS3AP61247 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS3AP61247 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPS3AP61247 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RPS3AP61247 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.27■□□□□ 0.68
RPS3AP61247 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.27■□□□□ 0.68
RPS3AP61247 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.27■□□□□ 0.68
RPS3AP61247 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPS3AP61247 AC079140.4-201ENST00000507448 529 ntBASIC19.27■□□□□ 0.68
RPS3AP61247 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.27■□□□□ 0.68
RPS3AP61247 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.27■□□□□ 0.68
RPS3AP61247 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS3AP61247 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPS3AP61247 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPS3AP61247 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.27■□□□□ 0.68
RPS3AP61247 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RPS3AP61247 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS3AP61247 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.26■□□□□ 0.67
RPS3AP61247 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RPS3AP61247 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS3AP61247 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.26■□□□□ 0.67
RPS3AP61247 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.26■□□□□ 0.67
RPS3AP61247 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.26■□□□□ 0.67
RPS3AP61247 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RPS3AP61247 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPS3AP61247 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPS3AP61247 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
RPS3AP61247 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.26■□□□□ 0.67
RPS3AP61247 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS3AP61247 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS3AP61247 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPS3AP61247 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS3AP61247 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RPS3AP61247 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.25■□□□□ 0.67
RPS3AP61247 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.25■□□□□ 0.67
RPS3AP61247 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.25■□□□□ 0.67
RPS3AP61247 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.25■□□□□ 0.67
RPS3AP61247 NTF6G-201ENST00000591094 616 ntBASIC19.25■□□□□ 0.67
RPS3AP61247 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.25■□□□□ 0.67
RPS3AP61247 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.25■□□□□ 0.67
RPS3AP61247 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.25■□□□□ 0.67
RPS3AP61247 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS3AP61247 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 AC087289.5-201ENST00000586076 3175 ntBASIC19.24■□□□□ 0.67
RPS3AP61247 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.24■□□□□ 0.67
RPS3AP61247 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RPS3AP61247 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.24■□□□□ 0.67
RPS3AP61247 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.24■□□□□ 0.67
RPS3AP61247 KRT18P5-201ENST00000436075 1291 ntBASIC19.24■□□□□ 0.67
RPS3AP61247 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.24■□□□□ 0.67
RPS3AP61247 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
RPS3AP61247 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.24■□□□□ 0.67
RPS3AP61247 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms