Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDE1AP54750 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PDE1AP54750 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.31■■□□□ 1.64
PDE1AP54750 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDE1AP54750 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PDE1AP54750 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.31■■□□□ 1.64
PDE1AP54750 AC007225.1-201ENST00000566331 1836 ntBASIC25.3■■□□□ 1.64
PDE1AP54750 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
PDE1AP54750 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.3■■□□□ 1.64
PDE1AP54750 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE1AP54750 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDE1AP54750 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE1AP54750 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDE1AP54750 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE1AP54750 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.3■■□□□ 1.64
PDE1AP54750 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.3■■□□□ 1.64
PDE1AP54750 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.3■■□□□ 1.64
PDE1AP54750 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PDE1AP54750 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
PDE1AP54750 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.3■■□□□ 1.64
PDE1AP54750 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.3■■□□□ 1.64
PDE1AP54750 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE1AP54750 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.3■■□□□ 1.64
PDE1AP54750 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE1AP54750 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.29■■□□□ 1.64
PDE1AP54750 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE1AP54750 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.29■■□□□ 1.64
PDE1AP54750 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PDE1AP54750 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.29■■□□□ 1.64
PDE1AP54750 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE1AP54750 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE1AP54750 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.29■■□□□ 1.64
PDE1AP54750 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.29■■□□□ 1.64
PDE1AP54750 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.29■■□□□ 1.64
PDE1AP54750 MIR5787-201ENST00000611784 55 ntBASIC25.29■■□□□ 1.64
PDE1AP54750 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.29■■□□□ 1.64
PDE1AP54750 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE1AP54750 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE1AP54750 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE1AP54750 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PDE1AP54750 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDE1AP54750 AC116050.2-201ENST00000612102 1779 ntBASIC25.28■■□□□ 1.64
PDE1AP54750 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDE1AP54750 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDE1AP54750 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PDE1AP54750 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PDE1AP54750 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.28■■□□□ 1.64
PDE1AP54750 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.28■■□□□ 1.64
PDE1AP54750 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
PDE1AP54750 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PDE1AP54750 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
PDE1AP54750 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDE1AP54750 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PDE1AP54750 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDE1AP54750 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.27■■□□□ 1.64
PDE1AP54750 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PDE1AP54750 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.27■■□□□ 1.64
PDE1AP54750 AC137761.2-201ENST00000561729 223 ntBASIC25.27■■□□□ 1.64
PDE1AP54750 AC145350.3-201ENST00000569033 163 ntBASIC25.27■■□□□ 1.64
PDE1AP54750 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.27■■□□□ 1.64
PDE1AP54750 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PDE1AP54750 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PDE1AP54750 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PDE1AP54750 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDE1AP54750 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.27■■□□□ 1.64
PDE1AP54750 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PDE1AP54750 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDE1AP54750 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDE1AP54750 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.26■■□□□ 1.63
PDE1AP54750 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.26■■□□□ 1.63
PDE1AP54750 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.26■■□□□ 1.63
PDE1AP54750 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.26■■□□□ 1.63
PDE1AP54750 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.26■■□□□ 1.63
PDE1AP54750 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.26■■□□□ 1.63
PDE1AP54750 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.26■■□□□ 1.63
PDE1AP54750 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.26■■□□□ 1.63
PDE1AP54750 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.26■■□□□ 1.63
PDE1AP54750 AC073314.1-201ENST00000568729 2216 ntBASIC25.26■■□□□ 1.63
PDE1AP54750 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PDE1AP54750 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.26■■□□□ 1.63
PDE1AP54750 AC027702.1-201ENST00000563810 1770 ntBASIC25.26■■□□□ 1.63
PDE1AP54750 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PDE1AP54750 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
PDE1AP54750 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
PDE1AP54750 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PDE1AP54750 AC010536.3-201ENST00000620306 533 ntBASIC25.25■■□□□ 1.63
PDE1AP54750 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDE1AP54750 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.25■■□□□ 1.63
PDE1AP54750 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
PDE1AP54750 FP700111.2-201ENST00000619190 1892 ntBASIC25.25■■□□□ 1.63
PDE1AP54750 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDE1AP54750 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC25.25■■□□□ 1.63
PDE1AP54750 LINC01006-201ENST00000333319 2292 ntBASIC25.25■■□□□ 1.63
PDE1AP54750 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDE1AP54750 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PDE1AP54750 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC25.25■■□□□ 1.63
PDE1AP54750 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDE1AP54750 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
PDE1AP54750 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDE1AP54750 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms