Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 SMARCC1-202ENST00000425518 3827 ntTSL 26.08□□□□□ -1.442e-9■■■■□ 22.5
SUB1P53999 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.62□□□□□ -0.398e-8■■■■□ 22.5
SUB1P53999 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.418e-8■■■■□ 22.5
SUB1P53999 HSP90B1-203ENST00000548462 3032 ntTSL 29.18□□□□□ -0.948e-8■■■■□ 22.5
SUB1P53999 HSP90B1-207ENST00000550595 694 ntTSL 23.23□□□□□ -1.898e-8■■■■□ 22.5
SUB1P53999 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.244e-6■■■■□ 22.5
SUB1P53999 MAGOHB-203ENST00000537852 2671 ntTSL 26.65□□□□□ -1.354e-6■■■■□ 22.5
SUB1P53999 MAGOHB-208ENST00000544850 1057 ntTSL 26.07□□□□□ -1.444e-6■■■■□ 22.5
SUB1P53999 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.06□□□□□ -1.64e-6■■■■□ 22.5
SUB1P53999 MAGOHB-202ENST00000398874 549 ntTSL 23.01□□□□□ -1.934e-6■■■■□ 22.5
SUB1P53999 NDUFV1-222ENST00000532260 574 ntTSL 417.45■□□□□ 0.382e-8■■■■□ 22.5
SUB1P53999 NDUFV1-227ENST00000534139 626 ntTSL 316.56■□□□□ 0.242e-8■■■■□ 22.5
SUB1P53999 NDUFV1-217ENST00000530014 766 ntTSL 515.71■□□□□ 0.112e-8■■■■□ 22.5
SUB1P53999 NDUFV1-225ENST00000533075 582 ntTSL 315.57■□□□□ 0.082e-8■■■■□ 22.5
SUB1P53999 NDUFV1-218ENST00000530103 544 ntTSL 514.99□□□□□ -0.012e-8■■■■□ 22.5
SUB1P53999 NDUFV1-205ENST00000525086 575 ntTSL 414.99□□□□□ -0.012e-8■■■■□ 22.5
SUB1P53999 NDUFV1-221ENST00000532244 786 ntTSL 214.57□□□□□ -0.082e-8■■■■□ 22.5
SUB1P53999 NDUFV1-219ENST00000530638 582 ntTSL 513.38□□□□□ -0.272e-8■■■■□ 22.5
SUB1P53999 NDUFV1-203ENST00000524838 1200 ntTSL 1 (best)12.23□□□□□ -0.452e-8■■■■□ 22.5
SUB1P53999 NDUFV1-204ENST00000524876 584 ntTSL 411.88□□□□□ -0.512e-8■■■■□ 22.5
SUB1P53999 NDUFV1-224ENST00000532343 620 ntTSL 310.41□□□□□ -0.742e-8■■■■□ 22.5
SUB1P53999 NDUFV1-215ENST00000529867 582 ntTSL 310.41□□□□□ -0.742e-8■■■■□ 22.5
SUB1P53999 NDUFV1-212ENST00000528328 477 ntTSL 410.38□□□□□ -0.752e-8■■■■□ 22.5
SUB1P53999 NDUFV1-214ENST00000528548 579 ntTSL 48.83□□□□□ -12e-8■■■■□ 22.5
SUB1P53999 NDUFV1-206ENST00000526138 557 ntTSL 47.21□□□□□ -1.262e-8■■■■□ 22.5
SUB1P53999 PITRM1-211ENST00000490510 778 ntTSL 214.11□□□□□ -0.151e-8■■■■□ 22.5
SUB1P53999 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.47□□□□□ -0.571e-8■■■■□ 22.5
SUB1P53999 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.781e-8■■■■□ 22.5
SUB1P53999 PITRM1-202ENST00000380989 3487 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.981e-8■■■■□ 22.5
SUB1P53999 PITRM1-209ENST00000464395 3240 ntTSL 1 (best)8.72□□□□□ -1.011e-8■■■■□ 22.5
SUB1P53999 PITRM1-203ENST00000380994 2579 ntTSL 5 BASIC8.15□□□□□ -1.11e-8■■■■□ 22.5
SUB1P53999 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.365e-8■■■■□ 22.5
SUB1P53999 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.82□□□□□ -0.365e-8■■■■□ 22.5
SUB1P53999 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.365e-8■■■■□ 22.5
SUB1P53999 TMEM208-202ENST00000561586 698 ntTSL 212□□□□□ -0.495e-8■■■■□ 22.5
SUB1P53999 TMEM208-208ENST00000564087 518 ntTSL 511.56□□□□□ -0.565e-8■■■■□ 22.5
SUB1P53999 TMEM208-211ENST00000566486 796 ntTSL 311.56□□□□□ -0.565e-8■■■■□ 22.5
SUB1P53999 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC9.44□□□□□ -0.95e-8■■■■□ 22.5
SUB1P53999 PLRG1-212ENST00000512773 570 ntTSL 23.61□□□□□ -1.835e-8■■■■□ 22.5
SUB1P53999 PLRG1-207ENST00000506627 998 ntTSL 53.43□□□□□ -1.865e-8■■■■□ 22.5
SUB1P53999 TM2D1-206ENST00000472357 744 ntTSL 22.83□□□□□ -1.965e-8■■■■□ 22.5
SUB1P53999 PLRG1-203ENST00000503251 365 ntTSL 31.76□□□□□ -2.135e-8■■■■□ 22.5
SUB1P53999 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.934e-11■■■■□ 22.5
SUB1P53999 PFKM-206ENST00000546964 3063 ntTSL 1 (best)8.21□□□□□ -1.14e-11■■■■□ 22.5
SUB1P53999 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC8.13□□□□□ -1.114e-11■■■■□ 22.5
SUB1P53999 PFKM-225ENST00000551804 2797 ntTSL 5 BASIC8.12□□□□□ -1.114e-11■■■■□ 22.5
SUB1P53999 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.234e-11■■■■□ 22.5
SUB1P53999 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.234e-11■■■■□ 22.5
SUB1P53999 PFKM-209ENST00000547581 3579 ntTSL 27.03□□□□□ -1.284e-11■■■■□ 22.5
SUB1P53999 NDUFB5-209ENST00000480374 729 ntTSL 38.89□□□□□ -0.999e-9■■■■□ 22.5
SUB1P53999 ACADVL-232ENST00000583074 410 ntTSL 514.13□□□□□ -0.152e-6■■■■□ 22.5
SUB1P53999 ACADVL-220ENST00000579546 582 ntTSL 513.17□□□□□ -0.32e-6■■■■□ 22.5
SUB1P53999 ACADVL-231ENST00000582450 294 ntTSL 211.34□□□□□ -0.592e-6■■■■□ 22.5
SUB1P53999 ACADVL-239ENST00000585203 947 ntTSL 511.08□□□□□ -0.642e-6■■■■□ 22.5
SUB1P53999 CRYZ-205ENST00000417775 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.011e-6■■■■□ 22.5
SUB1P53999 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.421e-6■■■■□ 22.5
SUB1P53999 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.48□□□□□ -1.691e-6■■■■□ 22.5
SUB1P53999 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.7□□□□□ -1.821e-6■■■■□ 22.5
SUB1P53999 CRYZ-207ENST00000492102 2899 ntTSL 1 (best)2.93□□□□□ -1.941e-6■■■■□ 22.5
SUB1P53999 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.54□□□□□ -0.42e-6■■■■□ 22.4
SUB1P53999 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-6■■■■□ 22.4
SUB1P53999 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC10.28□□□□□ -0.762e-6■■■■□ 22.4
SUB1P53999 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.83■□□□□ 0.61e-8■■■■□ 22.4
SUB1P53999 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.251e-8■■■■□ 22.4
SUB1P53999 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.24e-6■■■■□ 22.4
SUB1P53999 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.161e-8■■■■□ 22.4
SUB1P53999 YWHAB-207ENST00000631616 5867 ntTSL 1 (best)15.64■□□□□ 0.091e-8■■■■□ 22.4
SUB1P53999 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.084e-6■■■■□ 22.4
SUB1P53999 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.24■□□□□ 0.034e-6■■■■□ 22.4
SUB1P53999 DBNL-208ENST00000441840 1854 ntTSL 515.14■□□□□ 0.014e-6■■■■□ 22.4
SUB1P53999 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.12■□□□□ 0.011e-8■■■■□ 22.4
SUB1P53999 MYCBP-204ENST00000495043 819 ntTSL 214.89□□□□□ -0.031e-8■■■■□ 22.4
SUB1P53999 DBNL-211ENST00000449997 2169 ntTSL 214.27□□□□□ -0.134e-6■■■■□ 22.4
SUB1P53999 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.133e-16■■■■□ 22.4
SUB1P53999 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.09□□□□□ -0.151e-8■■■■□ 22.4
SUB1P53999 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.231e-8■■■■□ 22.4
SUB1P53999 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.35□□□□□ -0.271e-8■■■■□ 22.4
SUB1P53999 PFAS-202ENST00000546020 2652 ntTSL 213.12□□□□□ -0.311e-8■■■■□ 22.4
SUB1P53999 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.431e-8■■■■□ 22.4
SUB1P53999 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.91□□□□□ -0.51e-8■■■■□ 22.4
SUB1P53999 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.538e-7■■■■□ 22.4
SUB1P53999 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.64□□□□□ -0.551e-8■■■■□ 22.4
SUB1P53999 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.571e-8■■■■□ 22.4
SUB1P53999 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.61e-8■■■■□ 22.4
SUB1P53999 DBNL-221ENST00000497184 4090 ntTSL 1 (best)11.13□□□□□ -0.634e-6■■■■□ 22.4
SUB1P53999 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.11□□□□□ -0.631e-8■■■■□ 22.4
SUB1P53999 DBNL-204ENST00000432854 9618 ntTSL 511.07□□□□□ -0.644e-6■■■■□ 22.4
SUB1P53999 AL139260.3-202ENST00000454994 2381 ntTSL 210.82□□□□□ -0.681e-8■■■■□ 22.4
SUB1P53999 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.681e-8■■■■□ 22.4
SUB1P53999 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.723e-16■■■■□ 22.4
SUB1P53999 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC10.54□□□□□ -0.721e-8■■■■□ 22.4
SUB1P53999 EIF2D-202ENST00000367114 1633 ntTSL 1 (best) BASIC9.79□□□□□ -0.841e-8■■■■□ 22.4
SUB1P53999 PLEKHB2-208ENST00000439822 4177 ntTSL 3 BASIC9.75□□□□□ -0.851e-8■■■■□ 22.4
SUB1P53999 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.861e-8■■■■□ 22.4
SUB1P53999 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC9.59□□□□□ -0.871e-8■■■■□ 22.4
SUB1P53999 EIF2D-211ENST00000620382 1274 ntTSL 29.57□□□□□ -0.881e-8■■■■□ 22.4
SUB1P53999 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.931e-8■■■■□ 22.4
SUB1P53999 EIF2D-207ENST00000474408 484 ntTSL 38.32□□□□□ -1.081e-8■■■■□ 22.4
SUB1P53999 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.081e-8■■■■□ 22.4
SUB1P53999 YWHAB-206ENST00000479421 1097 ntTSL 58.29□□□□□ -1.081e-8■■■■□ 22.4
Retrieved 100 of 11,644 protein–RNA pairs in 224 ms