RNA–Protein interactions for RNA: ENST00000472357.1

TM2D1-206, Transcript of TM2 domain containing 1, humanhuman

TSL 2

Gene TM2D1, Length 744 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-206ENST00000472357 AEBP2Q6ZN18 517 aaPredicted RBP30.45■■■□□ 2.47
TM2D1-206ENST00000472357 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
TM2D1-206ENST00000472357 SENP3Q9H4L4 574 aaPredicted RBP25.91■■□□□ 1.74
TM2D1-206ENST00000472357 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
TM2D1-206ENST00000472357 FOXD1Q16676 465 aa24.31■■□□□ 1.48
TM2D1-206ENST00000472357 POTEDQ86YR6 584 aa23.33■■□□□ 1.33
TM2D1-206ENST00000472357 MSH5O43196 834 aa22.84■■□□□ 1.25
TM2D1-206ENST00000472357 PIAS4Q8N2W9 510 aaPredicted RBP22.5■■□□□ 1.19
TM2D1-206ENST00000472357 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
TM2D1-206ENST00000472357 PLPPR3Q6T4P5 718 aa22.29■■□□□ 1.16
TM2D1-206ENST00000472357 ADRA2BP18089 450 aa22.2■■□□□ 1.14
TM2D1-206ENST00000472357 MAPK8IP2Q13387 824 aaPredicted RBP20.58■□□□□ 0.89
TM2D1-206ENST00000472357 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
TM2D1-206ENST00000472357 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
TM2D1-206ENST00000472357 CACNB1Q02641 598 aaPredicted RBP19.92■□□□□ 0.78
TM2D1-206ENST00000472357 DCAF8L1A6NGE4 600 aa19.57■□□□□ 0.72
TM2D1-206ENST00000472357 HOXD11P31277 338 aaPredicted RBP19.56■□□□□ 0.72
TM2D1-206ENST00000472357 RNF39Q9H2S5 420 aa19.53■□□□□ 0.72
TM2D1-206ENST00000472357 PPP4R3CPQ6ZMV5 832 aa19.5■□□□□ 0.71
TM2D1-206ENST00000472357 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
TM2D1-206ENST00000472357 RNF216Q9NWF9 866 aaPredicted RBP19.22■□□□□ 0.67
TM2D1-206ENST00000472357 C1QBPQ07021 282 aaKnown RBP19.14■□□□□ 0.65
TM2D1-206ENST00000472357 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
TM2D1-206ENST00000472357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.56
TM2D1-206ENST00000472357 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
TM2D1-206ENST00000472357 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
TM2D1-206ENST00000472357 U3KPZ7 1027 aaPredicted RBP18.2■□□□□ 0.5
TM2D1-206ENST00000472357 POTEHQ6S545 545 aa18.13■□□□□ 0.49
TM2D1-206ENST00000472357 DSG3P32926 999 aa18.1■□□□□ 0.49
TM2D1-206ENST00000472357 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
TM2D1-206ENST00000472357 CAPN15O75808 1086 aa17.97■□□□□ 0.47
TM2D1-206ENST00000472357 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
TM2D1-206ENST00000472357 ABCB7O75027 752 aa17.57■□□□□ 0.4
TM2D1-206ENST00000472357 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
TM2D1-206ENST00000472357 KCNA4P22459 653 aa17.53■□□□□ 0.4
TM2D1-206ENST00000472357 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
TM2D1-206ENST00000472357 APLP2Q06481 763 aa17.42■□□□□ 0.38
TM2D1-206ENST00000472357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
TM2D1-206ENST00000472357 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
TM2D1-206ENST00000472357 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
TM2D1-206ENST00000472357 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
TM2D1-206ENST00000472357 CHRDL2Q6WN34 429 aa17.08■□□□□ 0.32
TM2D1-206ENST00000472357 POLA2Q14181 598 aa17.01■□□□□ 0.31
TM2D1-206ENST00000472357 MYCNP04198 464 aaPredicted RBP16.92■□□□□ 0.3
TM2D1-206ENST00000472357 SP7Q8TDD2 431 aaPredicted RBP16.74■□□□□ 0.27
TM2D1-206ENST00000472357 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
TM2D1-206ENST00000472357 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
TM2D1-206ENST00000472357 PIP4P2Q8N4L2 257 aa16.6■□□□□ 0.25
TM2D1-206ENST00000472357 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
TM2D1-206ENST00000472357 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
TM2D1-206ENST00000472357 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
TM2D1-206ENST00000472357 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
TM2D1-206ENST00000472357 PITPNM1O00562 1244 aa16.44■□□□□ 0.22
TM2D1-206ENST00000472357 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.22
TM2D1-206ENST00000472357 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
TM2D1-206ENST00000472357 HAX1O00165 279 aa16.35■□□□□ 0.21
TM2D1-206ENST00000472357 EVX2Q03828 476 aa16.27■□□□□ 0.2
TM2D1-206ENST00000472357 ZBTB22O15209 634 aa16.18■□□□□ 0.18
TM2D1-206ENST00000472357 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
TM2D1-206ENST00000472357 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
TM2D1-206ENST00000472357 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
TM2D1-206ENST00000472357 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
TM2D1-206ENST00000472357 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
TM2D1-206ENST00000472357 C19orf67A6NJJ6 358 aa15.91■□□□□ 0.14
TM2D1-206ENST00000472357 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
TM2D1-206ENST00000472357 FBLN2P98095 1184 aa15.89■□□□□ 0.13
TM2D1-206ENST00000472357 SPDYE1Q8NFV5 336 aaPredicted RBP15.86■□□□□ 0.13
TM2D1-206ENST00000472357 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
TM2D1-206ENST00000472357 SSUH2Q9Y2M2 353 aa15.84■□□□□ 0.13
TM2D1-206ENST00000472357 GABBR2O75899 941 aa15.79■□□□□ 0.12
TM2D1-206ENST00000472357 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
TM2D1-206ENST00000472357 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
TM2D1-206ENST00000472357 LHX8Q68G74 356 aa15.67■□□□□ 0.1
TM2D1-206ENST00000472357 POTEIP0CG38 1075 aa15.53■□□□□ 0.08
TM2D1-206ENST00000472357 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
TM2D1-206ENST00000472357 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
TM2D1-206ENST00000472357 CD44P16070 742 aaKnown RBP15.41■□□□□ 0.06
TM2D1-206ENST00000472357 FARP1Q9Y4F1 1045 aaPredicted RBP15.39■□□□□ 0.05
TM2D1-206ENST00000472357 CLCN6P51797 869 aa15.24■□□□□ 0.03
TM2D1-206ENST00000472357 ZNF579Q8NAF0 562 aaKnown RBP15.19■□□□□ 0.02
TM2D1-206ENST00000472357 DCBLD2Q96PD2 775 aa15.14■□□□□ 0.01
TM2D1-206ENST00000472357 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
TM2D1-206ENST00000472357 ZRANB1Q9UGI0 708 aa15.1■□□□□ 0.01
TM2D1-206ENST00000472357 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
TM2D1-206ENST00000472357 PLSCR2Q9NRY7 297 aa15.06■□□□□ 0
TM2D1-206ENST00000472357 OTUD5Q96G74 571 aa15.02■□□□□ -0
TM2D1-206ENST00000472357 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
TM2D1-206ENST00000472357 PHF12Q96QT6 1004 aa14.9□□□□□ -0.02
TM2D1-206ENST00000472357 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
TM2D1-206ENST00000472357 CSRNP3Q8WYN3 585 aa14.88□□□□□ -0.03
TM2D1-206ENST00000472357 PELP1Q8IZL8 1130 aaKnown RBP14.87□□□□□ -0.03
TM2D1-206ENST00000472357 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
TM2D1-206ENST00000472357 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
TM2D1-206ENST00000472357 POTEMA6NI47 508 aa14.78□□□□□ -0.04
TM2D1-206ENST00000472357 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
TM2D1-206ENST00000472357 PAK3O75914 559 aaPredicted RBP14.75□□□□□ -0.05
TM2D1-206ENST00000472357 POTEJP0CG39 1038 aa14.74□□□□□ -0.05
TM2D1-206ENST00000472357 POTEGQ6S5H5 508 aa14.73□□□□□ -0.05
TM2D1-206ENST00000472357 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
TM2D1-206ENST00000472357 MS4A3Q96HJ5 214 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms