Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.41■□□□□ 0.7
EFNA3P52797 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EFNA3P52797 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
EFNA3P52797 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
EFNA3P52797 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.41■□□□□ 0.7
EFNA3P52797 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EFNA3P52797 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.41■□□□□ 0.7
EFNA3P52797 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA3P52797 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.4■□□□□ 0.7
EFNA3P52797 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA3P52797 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA3P52797 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA3P52797 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA3P52797 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA3P52797 AL355472.2-201ENST00000422958 438 ntBASIC19.4■□□□□ 0.7
EFNA3P52797 AC069152.1-201ENST00000438030 544 ntBASIC19.4■□□□□ 0.7
EFNA3P52797 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.4■□□□□ 0.7
EFNA3P52797 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.4■□□□□ 0.7
EFNA3P52797 FAM21FP-204ENST00000608637 956 ntBASIC19.4■□□□□ 0.7
EFNA3P52797 AC008694.1-202ENST00000636953 945 ntBASIC19.4■□□□□ 0.7
EFNA3P52797 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA3P52797 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA3P52797 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EFNA3P52797 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EFNA3P52797 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.4■□□□□ 0.7
EFNA3P52797 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA3P52797 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.4■□□□□ 0.7
EFNA3P52797 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
EFNA3P52797 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EFNA3P52797 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
EFNA3P52797 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNA3P52797 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNA3P52797 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.39■□□□□ 0.69
EFNA3P52797 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNA3P52797 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNA3P52797 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNA3P52797 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.39■□□□□ 0.69
EFNA3P52797 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.39■□□□□ 0.69
EFNA3P52797 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.39■□□□□ 0.69
EFNA3P52797 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EFNA3P52797 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNA3P52797 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNA3P52797 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNA3P52797 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNA3P52797 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
EFNA3P52797 BX276092.2-201ENST00000417668 665 ntBASIC19.38■□□□□ 0.69
EFNA3P52797 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.38■□□□□ 0.69
EFNA3P52797 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.38■□□□□ 0.69
EFNA3P52797 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.38■□□□□ 0.69
EFNA3P52797 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
EFNA3P52797 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.38■□□□□ 0.69
EFNA3P52797 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EFNA3P52797 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.38■□□□□ 0.69
EFNA3P52797 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EFNA3P52797 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
EFNA3P52797 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
EFNA3P52797 AF106564.1-201ENST00000607058 2553 ntBASIC19.38■□□□□ 0.69
EFNA3P52797 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNA3P52797 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNA3P52797 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFNA3P52797 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNA3P52797 KRT17P1-201ENST00000399211 1546 ntBASIC19.37■□□□□ 0.69
EFNA3P52797 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.37■□□□□ 0.69
EFNA3P52797 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNA3P52797 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
EFNA3P52797 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
EFNA3P52797 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.37■□□□□ 0.69
EFNA3P52797 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFNA3P52797 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.37■□□□□ 0.69
EFNA3P52797 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.37■□□□□ 0.69
EFNA3P52797 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.37■□□□□ 0.69
EFNA3P52797 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFNA3P52797 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFNA3P52797 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
EFNA3P52797 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNA3P52797 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
EFNA3P52797 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
EFNA3P52797 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFNA3P52797 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFNA3P52797 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EFNA3P52797 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.36■□□□□ 0.69
EFNA3P52797 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFNA3P52797 AC007322.3-201ENST00000426526 701 ntBASIC19.36■□□□□ 0.69
EFNA3P52797 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFNA3P52797 AC073210.2-201ENST00000430369 194 ntBASIC19.36■□□□□ 0.69
EFNA3P52797 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
EFNA3P52797 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.36■□□□□ 0.69
EFNA3P52797 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.36■□□□□ 0.69
EFNA3P52797 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFNA3P52797 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EFNA3P52797 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFNA3P52797 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFNA3P52797 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.36■□□□□ 0.69
EFNA3P52797 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms