Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.17■□□□□ 0.5
CCR9P51686 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCR9P51686 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCR9P51686 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCR9P51686 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCR9P51686 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CCR9P51686 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.16■□□□□ 0.5
CCR9P51686 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.16■□□□□ 0.5
CCR9P51686 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCR9P51686 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCR9P51686 AC135279.3-201ENST00000610945 1311 ntBASIC18.16■□□□□ 0.5
CCR9P51686 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.16■□□□□ 0.5
CCR9P51686 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCR9P51686 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CCR9P51686 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCR9P51686 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.15■□□□□ 0.5
CCR9P51686 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.15■□□□□ 0.5
CCR9P51686 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.15■□□□□ 0.5
CCR9P51686 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.15■□□□□ 0.5
CCR9P51686 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.15■□□□□ 0.5
CCR9P51686 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.15■□□□□ 0.5
CCR9P51686 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CCR9P51686 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCR9P51686 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCR9P51686 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.15■□□□□ 0.5
CCR9P51686 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.15■□□□□ 0.5
CCR9P51686 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.14■□□□□ 0.5
CCR9P51686 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.14■□□□□ 0.5
CCR9P51686 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.14■□□□□ 0.5
CCR9P51686 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCR9P51686 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CCR9P51686 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CCR9P51686 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.14■□□□□ 0.49
CCR9P51686 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.14■□□□□ 0.49
CCR9P51686 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.14■□□□□ 0.49
CCR9P51686 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.14■□□□□ 0.49
CCR9P51686 AC053503.5-201ENST00000601508 636 ntBASIC18.14■□□□□ 0.49
CCR9P51686 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.14■□□□□ 0.49
CCR9P51686 AFG3L1P-217ENST00000557444 2447 ntBASIC18.14■□□□□ 0.49
CCR9P51686 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCR9P51686 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCR9P51686 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
CCR9P51686 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR9P51686 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 AC011484.1-201ENST00000377652 1995 ntBASIC18.13■□□□□ 0.49
CCR9P51686 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.13■□□□□ 0.49
CCR9P51686 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.13■□□□□ 0.49
CCR9P51686 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.13■□□□□ 0.49
CCR9P51686 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCR9P51686 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.13■□□□□ 0.49
CCR9P51686 EEF1DP3-203ENST00000566025 782 ntBASIC18.13■□□□□ 0.49
CCR9P51686 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CCR9P51686 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.13■□□□□ 0.49
CCR9P51686 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CCR9P51686 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.13■□□□□ 0.49
CCR9P51686 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms