Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GRIA1P42261 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 GABARAPL3-202ENST00000624044 1851 ntBASIC20.96■□□□□ 0.95
GRIA1P42261 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
GRIA1P42261 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.96■□□□□ 0.95
GRIA1P42261 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
GRIA1P42261 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.95■□□□□ 0.94
GRIA1P42261 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
GRIA1P42261 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.95■□□□□ 0.94
GRIA1P42261 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
GRIA1P42261 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
GRIA1P42261 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
GRIA1P42261 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.95■□□□□ 0.94
GRIA1P42261 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.95■□□□□ 0.94
GRIA1P42261 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.95■□□□□ 0.94
GRIA1P42261 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.95■□□□□ 0.94
GRIA1P42261 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA1P42261 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
GRIA1P42261 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.94■□□□□ 0.94
GRIA1P42261 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.94■□□□□ 0.94
GRIA1P42261 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
GRIA1P42261 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
GRIA1P42261 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.94■□□□□ 0.94
GRIA1P42261 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.94■□□□□ 0.94
GRIA1P42261 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.94■□□□□ 0.94
GRIA1P42261 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.94■□□□□ 0.94
GRIA1P42261 DUX4L2-201ENST00000561772 1275 ntBASIC20.94■□□□□ 0.94
GRIA1P42261 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.94■□□□□ 0.94
GRIA1P42261 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
GRIA1P42261 DUX4L6-201ENST00000626483 1275 ntBASIC20.94■□□□□ 0.94
GRIA1P42261 DUX4L1-201ENST00000627662 1275 ntBASIC20.94■□□□□ 0.94
GRIA1P42261 DUX4L8-201ENST00000629013 1275 ntBASIC20.94■□□□□ 0.94
GRIA1P42261 DUX4L3-201ENST00000630187 1275 ntBASIC20.94■□□□□ 0.94
GRIA1P42261 DUX4L7-201ENST00000630678 1275 ntBASIC20.94■□□□□ 0.94
GRIA1P42261 DUX4L5-201ENST00000630834 1275 ntBASIC20.94■□□□□ 0.94
GRIA1P42261 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.94■□□□□ 0.94
GRIA1P42261 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.94■□□□□ 0.94
GRIA1P42261 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 KRT16P2-201ENST00000414673 1423 ntBASIC20.94■□□□□ 0.94
GRIA1P42261 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.94■□□□□ 0.94
GRIA1P42261 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.94■□□□□ 0.94
GRIA1P42261 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA1P42261 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA1P42261 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.93■□□□□ 0.94
GRIA1P42261 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA1P42261 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA1P42261 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA1P42261 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.93■□□□□ 0.94
GRIA1P42261 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.93■□□□□ 0.94
GRIA1P42261 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA1P42261 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.93■□□□□ 0.94
GRIA1P42261 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA1P42261 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.93■□□□□ 0.94
GRIA1P42261 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA1P42261 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.93■□□□□ 0.94
GRIA1P42261 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
GRIA1P42261 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GRIA1P42261 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
GRIA1P42261 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.93■□□□□ 0.94
GRIA1P42261 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
GRIA1P42261 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.92■□□□□ 0.94
GRIA1P42261 AL121603.2-201ENST00000557373 2117 ntBASIC20.92■□□□□ 0.94
GRIA1P42261 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GRIA1P42261 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms