Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNCAP37840 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.94■□□□□ 0.3
SNCAP37840 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SNCAP37840 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SNCAP37840 AC018445.3-201ENST00000624177 1945 ntBASIC16.94■□□□□ 0.3
SNCAP37840 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SNCAP37840 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.94■□□□□ 0.3
SNCAP37840 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNCAP37840 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.94■□□□□ 0.3
SNCAP37840 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNCAP37840 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.94■□□□□ 0.3
SNCAP37840 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNCAP37840 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNCAP37840 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SNCAP37840 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SNCAP37840 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNCAP37840 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.94■□□□□ 0.3
SNCAP37840 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNCAP37840 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNCAP37840 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNCAP37840 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SNCAP37840 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SNCAP37840 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.93■□□□□ 0.3
SNCAP37840 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SNCAP37840 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 AC010525.1-201ENST00000585559 441 ntBASIC16.93■□□□□ 0.3
SNCAP37840 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SNCAP37840 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.93■□□□□ 0.3
SNCAP37840 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 SMG8-203ENST00000578922 2178 ntBASIC16.93■□□□□ 0.3
SNCAP37840 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SNCAP37840 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.93■□□□□ 0.3
SNCAP37840 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 AC073314.1-201ENST00000568729 2216 ntBASIC16.93■□□□□ 0.3
SNCAP37840 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.93■□□□□ 0.3
SNCAP37840 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNCAP37840 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SNCAP37840 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SNCAP37840 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 BX323043.1-201ENST00000641006 1765 ntBASIC16.92■□□□□ 0.3
SNCAP37840 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SNCAP37840 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.92■□□□□ 0.3
SNCAP37840 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 AP004607.7-201ENST00000527152 1677 ntBASIC16.92■□□□□ 0.3
SNCAP37840 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.92■□□□□ 0.3
SNCAP37840 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.92■□□□□ 0.3
SNCAP37840 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SNCAP37840 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.92■□□□□ 0.3
SNCAP37840 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SNCAP37840 AL512631.2-201ENST00000604634 923 ntBASIC16.92■□□□□ 0.3
SNCAP37840 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.92■□□□□ 0.3
SNCAP37840 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.92■□□□□ 0.3
SNCAP37840 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
SNCAP37840 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNCAP37840 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.91■□□□□ 0.3
SNCAP37840 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
SNCAP37840 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.91■□□□□ 0.3
SNCAP37840 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.91■□□□□ 0.3
SNCAP37840 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNCAP37840 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SNCAP37840 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SNCAP37840 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.91■□□□□ 0.3
SNCAP37840 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.9■□□□□ 0.3
SNCAP37840 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.9■□□□□ 0.3
SNCAP37840 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.9■□□□□ 0.3
SNCAP37840 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.9■□□□□ 0.3
SNCAP37840 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms