Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.1■□□□□ 0.81
EPHA3P29320 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.1■□□□□ 0.81
EPHA3P29320 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHA3P29320 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHA3P29320 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHA3P29320 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHA3P29320 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
EPHA3P29320 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHA3P29320 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHA3P29320 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.08■□□□□ 0.81
EPHA3P29320 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHA3P29320 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EPHA3P29320 AC099778.1-201ENST00000568593 1911 ntBASIC20.08■□□□□ 0.81
EPHA3P29320 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHA3P29320 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHA3P29320 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
EPHA3P29320 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EPHA3P29320 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHA3P29320 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EPHA3P29320 MIR4767-201ENST00000582827 78 ntBASIC20.08■□□□□ 0.81
EPHA3P29320 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.08■□□□□ 0.81
EPHA3P29320 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.08■□□□□ 0.81
EPHA3P29320 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
EPHA3P29320 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
EPHA3P29320 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.08■□□□□ 0.8
EPHA3P29320 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EPHA3P29320 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.08■□□□□ 0.8
EPHA3P29320 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
EPHA3P29320 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.07■□□□□ 0.8
EPHA3P29320 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
EPHA3P29320 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
EPHA3P29320 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.07■□□□□ 0.8
EPHA3P29320 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.07■□□□□ 0.8
EPHA3P29320 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.07■□□□□ 0.8
EPHA3P29320 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.07■□□□□ 0.8
EPHA3P29320 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
EPHA3P29320 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHA3P29320 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.06■□□□□ 0.8
EPHA3P29320 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.06■□□□□ 0.8
EPHA3P29320 AC233992.3-201ENST00000607491 485 ntBASIC20.06■□□□□ 0.8
EPHA3P29320 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 AC005224.4-201ENST00000583262 1652 ntBASIC20.06■□□□□ 0.8
EPHA3P29320 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.06■□□□□ 0.8
EPHA3P29320 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHA3P29320 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.05■□□□□ 0.8
EPHA3P29320 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA3P29320 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
EPHA3P29320 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA3P29320 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA3P29320 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA3P29320 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHA3P29320 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHA3P29320 IGHV3-19-201ENST00000521488 291 ntBASIC20.05■□□□□ 0.8
EPHA3P29320 AC126544.1-201ENST00000580842 1059 ntBASIC20.05■□□□□ 0.8
EPHA3P29320 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHA3P29320 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA3P29320 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.05■□□□□ 0.8
EPHA3P29320 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA3P29320 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA3P29320 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.05■□□□□ 0.8
EPHA3P29320 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA3P29320 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.04■□□□□ 0.8
EPHA3P29320 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
EPHA3P29320 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
EPHA3P29320 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms