Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.77■□□□□ 0.59
GDF1P27539 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
GDF1P27539 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
GDF1P27539 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.76■□□□□ 0.59
GDF1P27539 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 AC116050.2-201ENST00000612102 1779 ntBASIC18.76■□□□□ 0.59
GDF1P27539 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.76■□□□□ 0.59
GDF1P27539 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.76■□□□□ 0.59
GDF1P27539 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.76■□□□□ 0.59
GDF1P27539 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.76■□□□□ 0.59
GDF1P27539 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.76■□□□□ 0.59
GDF1P27539 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.76■□□□□ 0.59
GDF1P27539 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.76■□□□□ 0.59
GDF1P27539 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.76■□□□□ 0.59
GDF1P27539 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.76■□□□□ 0.59
GDF1P27539 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDF1P27539 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDF1P27539 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDF1P27539 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
GDF1P27539 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDF1P27539 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDF1P27539 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDF1P27539 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDF1P27539 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
GDF1P27539 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDF1P27539 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
GDF1P27539 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.75■□□□□ 0.59
GDF1P27539 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDF1P27539 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.75■□□□□ 0.59
GDF1P27539 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
GDF1P27539 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDF1P27539 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.74■□□□□ 0.59
GDF1P27539 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.74■□□□□ 0.59
GDF1P27539 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GDF1P27539 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.74■□□□□ 0.59
GDF1P27539 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
GDF1P27539 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.74■□□□□ 0.59
GDF1P27539 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.74■□□□□ 0.59
GDF1P27539 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.74■□□□□ 0.59
GDF1P27539 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.74■□□□□ 0.59
GDF1P27539 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GDF1P27539 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDF1P27539 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.73■□□□□ 0.59
GDF1P27539 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.73■□□□□ 0.59
GDF1P27539 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.73■□□□□ 0.59
GDF1P27539 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.73■□□□□ 0.59
GDF1P27539 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 LSM12P1-201ENST00000411836 588 ntBASIC18.73■□□□□ 0.59
GDF1P27539 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.73■□□□□ 0.59
GDF1P27539 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.73■□□□□ 0.59
GDF1P27539 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.73■□□□□ 0.59
GDF1P27539 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.73■□□□□ 0.59
GDF1P27539 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.73■□□□□ 0.59
GDF1P27539 AC092118.2-201ENST00000613495 667 ntBASIC18.73■□□□□ 0.59
GDF1P27539 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.73■□□□□ 0.59
GDF1P27539 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
GDF1P27539 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
GDF1P27539 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.73■□□□□ 0.59
GDF1P27539 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDF1P27539 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GDF1P27539 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GDF1P27539 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GDF1P27539 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GDF1P27539 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GDF1P27539 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GDF1P27539 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GDF1P27539 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms