Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF1P18846 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ATF1P18846 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF1P18846 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATF1P18846 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.13■□□□□ 0.49
ATF1P18846 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATF1P18846 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ATF1P18846 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF1P18846 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ATF1P18846 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.13■□□□□ 0.49
ATF1P18846 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.13■□□□□ 0.49
ATF1P18846 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATF1P18846 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF1P18846 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.13■□□□□ 0.49
ATF1P18846 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF1P18846 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATF1P18846 AC009237.3-201ENST00000393279 1427 ntBASIC18.13■□□□□ 0.49
ATF1P18846 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF1P18846 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF1P18846 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.13■□□□□ 0.49
ATF1P18846 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.13■□□□□ 0.49
ATF1P18846 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.12■□□□□ 0.49
ATF1P18846 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ATF1P18846 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 AC008764.7-201ENST00000593779 1081 ntBASIC18.12■□□□□ 0.49
ATF1P18846 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.12■□□□□ 0.49
ATF1P18846 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ATF1P18846 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.12■□□□□ 0.49
ATF1P18846 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 AL162377.1-201ENST00000618844 1793 ntBASIC18.12■□□□□ 0.49
ATF1P18846 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATF1P18846 AL512408.1-201ENST00000569378 2000 ntBASIC18.11■□□□□ 0.49
ATF1P18846 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATF1P18846 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ATF1P18846 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.11■□□□□ 0.49
ATF1P18846 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.11■□□□□ 0.49
ATF1P18846 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ATF1P18846 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATF1P18846 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.11■□□□□ 0.49
ATF1P18846 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATF1P18846 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATF1P18846 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATF1P18846 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.11■□□□□ 0.49
ATF1P18846 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.11■□□□□ 0.49
ATF1P18846 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATF1P18846 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATF1P18846 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ATF1P18846 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATF1P18846 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATF1P18846 AC087289.5-201ENST00000586076 3175 ntBASIC18.1■□□□□ 0.49
ATF1P18846 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF1P18846 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF1P18846 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATF1P18846 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.1■□□□□ 0.49
ATF1P18846 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.1■□□□□ 0.49
ATF1P18846 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF1P18846 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF1P18846 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATF1P18846 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.1■□□□□ 0.49
ATF1P18846 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
ATF1P18846 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.1■□□□□ 0.49
ATF1P18846 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.1■□□□□ 0.49
ATF1P18846 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
ATF1P18846 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ATF1P18846 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF1P18846 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.09■□□□□ 0.49
ATF1P18846 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ATF1P18846 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.09■□□□□ 0.49
ATF1P18846 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.09■□□□□ 0.49
ATF1P18846 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.09■□□□□ 0.49
ATF1P18846 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.09■□□□□ 0.49
ATF1P18846 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATF1P18846 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.09■□□□□ 0.49
ATF1P18846 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.09■□□□□ 0.49
ATF1P18846 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.09■□□□□ 0.49
ATF1P18846 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms