Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.9■□□□□ 0.62
P04436 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.9■□□□□ 0.62
P04436 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.9■□□□□ 0.62
P04436 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.9■□□□□ 0.62
P04436 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 AC073210.2-201ENST00000430369 194 ntBASIC18.9■□□□□ 0.62
P04436 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.9■□□□□ 0.62
P04436 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.9■□□□□ 0.62
P04436 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.9■□□□□ 0.62
P04436 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.9■□□□□ 0.62
P04436 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.9■□□□□ 0.62
P04436 AC100791.3-201ENST00000617619 330 ntBASIC18.9■□□□□ 0.62
P04436 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.9■□□□□ 0.62
P04436 Z98882.1-201ENST00000622160 2253 ntBASIC18.9■□□□□ 0.62
P04436 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.9■□□□□ 0.62
P04436 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
P04436 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
P04436 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.89■□□□□ 0.62
P04436 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
P04436 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
P04436 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P04436 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
P04436 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
P04436 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.89■□□□□ 0.61
P04436 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.89■□□□□ 0.61
P04436 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.89■□□□□ 0.61
P04436 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.89■□□□□ 0.61
P04436 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.89■□□□□ 0.61
P04436 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.89■□□□□ 0.61
P04436 AC092118.2-201ENST00000613495 667 ntBASIC18.89■□□□□ 0.61
P04436 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P04436 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.89■□□□□ 0.61
P04436 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
P04436 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
P04436 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.89■□□□□ 0.61
P04436 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.88■□□□□ 0.61
P04436 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
P04436 LSM12P1-201ENST00000411836 588 ntBASIC18.88■□□□□ 0.61
P04436 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.88■□□□□ 0.61
P04436 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
P04436 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.88■□□□□ 0.61
P04436 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
P04436 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.88■□□□□ 0.61
P04436 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04436 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.88■□□□□ 0.61
P04436 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.88■□□□□ 0.61
P04436 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
P04436 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04436 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04436 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04436 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P04436 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04436 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04436 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.87■□□□□ 0.61
P04436 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.87■□□□□ 0.61
P04436 MCRIP2P1-201ENST00000394346 511 ntBASIC18.87■□□□□ 0.61
P04436 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04436 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.87■□□□□ 0.61
P04436 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.87■□□□□ 0.61
P04436 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.87■□□□□ 0.61
P04436 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.87■□□□□ 0.61
P04436 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.87■□□□□ 0.61
P04436 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.87■□□□□ 0.61
P04436 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.87■□□□□ 0.61
P04436 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04436 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04436 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P04436 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P04436 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P04436 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04436 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.86■□□□□ 0.61
P04436 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.86■□□□□ 0.61
P04436 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
P04436 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.86■□□□□ 0.61
P04436 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.86■□□□□ 0.61
P04436 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.86■□□□□ 0.61
P04436 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
P04436 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
P04436 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04436 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
P04436 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
P04436 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms