Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.06□□□□□ -0.32
APOBP04114 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 AC005521.1-201ENST00000393351 872 ntBASIC13.06□□□□□ -0.32
APOBP04114 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.06□□□□□ -0.32
APOBP04114 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.06□□□□□ -0.32
APOBP04114 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.06□□□□□ -0.32
APOBP04114 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APOBP04114 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBP04114 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOBP04114 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOBP04114 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.05□□□□□ -0.32
APOBP04114 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOBP04114 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.05□□□□□ -0.32
APOBP04114 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.05□□□□□ -0.32
APOBP04114 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
APOBP04114 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOBP04114 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOBP04114 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
APOBP04114 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.05□□□□□ -0.32
APOBP04114 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.05□□□□□ -0.32
APOBP04114 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOBP04114 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOBP04114 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOBP04114 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
APOBP04114 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOBP04114 KRT18P68-201ENST00000392293 1000 ntBASIC13.05□□□□□ -0.32
APOBP04114 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.05□□□□□ -0.32
APOBP04114 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.05□□□□□ -0.32
APOBP04114 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.05□□□□□ -0.32
APOBP04114 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.05□□□□□ -0.32
APOBP04114 REXO1L10P-201ENST00000615707 1290 ntBASIC13.05□□□□□ -0.32
APOBP04114 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.05□□□□□ -0.32
APOBP04114 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC13.05□□□□□ -0.32
APOBP04114 AL135905.2-201ENST00000584934 1404 ntBASIC13.05□□□□□ -0.32
APOBP04114 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.05□□□□□ -0.32
APOBP04114 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.05□□□□□ -0.32
APOBP04114 AL590326.2-201ENST00000625139 305 ntBASIC13.05□□□□□ -0.32
APOBP04114 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC13.04□□□□□ -0.32
APOBP04114 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.04□□□□□ -0.32
APOBP04114 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.04□□□□□ -0.32
APOBP04114 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOBP04114 AC005829.2-201ENST00000571422 1056 ntBASIC13.04□□□□□ -0.32
APOBP04114 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.04□□□□□ -0.32
APOBP04114 COMT-203ENST00000403184 2217 ntTSL 2 BASIC13.04□□□□□ -0.32
APOBP04114 CYP2D8P-201ENST00000433633 1490 ntBASIC13.04□□□□□ -0.32
APOBP04114 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 AC026471.6-201ENST00000622954 1905 ntBASIC13.04□□□□□ -0.32
APOBP04114 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
APOBP04114 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOBP04114 AC010947.1-201ENST00000623454 693 ntBASIC13.04□□□□□ -0.32
APOBP04114 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.04□□□□□ -0.32
APOBP04114 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.04□□□□□ -0.32
APOBP04114 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBP04114 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBP04114 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
APOBP04114 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBP04114 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBP04114 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBP04114 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOBP04114 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBP04114 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBP04114 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBP04114 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOBP04114 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBP04114 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBP04114 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBP04114 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
APOBP04114 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBP04114 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBP04114 AP001412.1-201ENST00000608405 714 ntBASIC13.03□□□□□ -0.32
APOBP04114 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms