Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV26-1A0A087WT03 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 KRT18P5-201ENST00000436075 1291 ntBASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 AC104564.3-201ENST00000582367 638 ntBASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV26-1A0A087WT03 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 FBXW4P1-201ENST00000426721 2239 ntBASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV26-1A0A087WT03 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 KRT19P1-201ENST00000405746 1186 ntBASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 AC104187.1-201ENST00000607510 612 ntBASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 AP004607.4-201ENST00000530158 1459 ntBASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV26-1A0A087WT03 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV26-1A0A087WT03 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV26-1A0A087WT03 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV26-1A0A087WT03 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV26-1A0A087WT03 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRAV26-1A0A087WT03 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV26-1A0A087WT03 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV26-1A0A087WT03 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV26-1A0A087WT03 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV26-1A0A087WT03 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms