Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV6A0A075B6T7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV6A0A075B6T7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV6A0A075B6T7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV6A0A075B6T7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV6A0A075B6T7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV6A0A075B6T7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV6A0A075B6T7 AIRN-201ENST00000601203 4374 ntBASIC17.71■□□□□ 0.43
TRAV6A0A075B6T7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV6A0A075B6T7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV6A0A075B6T7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV6A0A075B6T7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 MIR639-201ENST00000384974 98 ntBASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 AC121338.2-201ENST00000622535 1744 ntBASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 AC005703.6-201ENST00000623265 1329 ntBASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
TRAV6A0A075B6T7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 KRT18P24-201ENST00000344739 1156 ntBASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV6A0A075B6T7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 LETM1P2-201ENST00000597330 2178 ntBASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV6A0A075B6T7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV6A0A075B6T7 AC003102.1-202ENST00000563394 1796 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms