Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 SERBP1P1-201ENST00000396021 1160 ntBASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 AC010525.1-201ENST00000585559 441 ntBASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 SMG8-203ENST00000578922 2178 ntBASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 BX323043.1-201ENST00000641006 1765 ntBASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV25-1A0A075B6N4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 AP005435.1-201ENST00000529293 1178 ntBASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV25-1A0A075B6N4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV25-1A0A075B6N4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV25-1A0A075B6N4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV25-1A0A075B6N4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV25-1A0A075B6N4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV25-1A0A075B6N4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 AP004607.7-201ENST00000527152 1677 ntBASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV25-1A0A075B6N4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 AP005212.1-201ENST00000581547 1997 ntBASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRBV25-1A0A075B6N4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms