Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 AC004801.7-201ENST00000624535 2973 ntBASIC8.84□□□□□ -0.99
P04436 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 NFYC-201ENST00000308733 2158 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 HSD17B7-202ENST00000367913 666 ntTSL 2 BASIC8.84□□□□□ -0.99
P04436 HSD17B3-202ENST00000375263 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 MIR629-201ENST00000385230 97 ntBASIC8.84□□□□□ -0.99
P04436 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 AC005005.1-201ENST00000397595 682 ntBASIC8.84□□□□□ -0.99
P04436 RN7SKP194-201ENST00000411328 351 ntBASIC8.84□□□□□ -0.99
P04436 AC108059.1-201ENST00000411629 725 ntBASIC8.84□□□□□ -0.99
P04436 HSD52-201ENST00000425914 1111 ntTSL 2 BASIC8.84□□□□□ -0.99
P04436 FAM136BP-201ENST00000428729 417 ntBASIC8.84□□□□□ -0.99
P04436 SNX25P1-201ENST00000441817 834 ntBASIC8.84□□□□□ -0.99
P04436 AC104088.1-201ENST00000445613 510 ntTSL 5 BASIC8.84□□□□□ -0.99
P04436 LINC00426-207ENST00000447147 1589 ntTSL 3 BASIC8.84□□□□□ -0.99
P04436 SSU72P1-201ENST00000449911 583 ntBASIC8.84□□□□□ -0.99
P04436 AC096536.1-203ENST00000455380 515 ntTSL 5 BASIC8.84□□□□□ -0.99
P04436 RN7SL865P-201ENST00000466711 289 ntBASIC8.84□□□□□ -0.99
P04436 RN7SL632P-201ENST00000489734 266 ntBASIC8.84□□□□□ -0.99
P04436 GAPDHP60-201ENST00000513846 995 ntBASIC8.84□□□□□ -0.99
P04436 AC021860.1-201ENST00000515436 376 ntTSL 5 BASIC8.84□□□□□ -0.99
P04436 IGHV3-33-2-201ENST00000517703 346 ntBASIC8.84□□□□□ -0.99
P04436 AC078927.1-201ENST00000539652 984 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
P04436 LINC02304-201ENST00000554445 445 ntTSL 3 BASIC8.84□□□□□ -0.99
P04436 DUOXA1-215ENST00000560572 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 LINC00566-201ENST00000561557 570 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 AC009831.3-201ENST00000582538 586 ntBASIC8.84□□□□□ -0.99
P04436 TSPAN16-205ENST00000592955 927 ntTSL 3 BASIC8.84□□□□□ -0.99
P04436 LINC00649-209ENST00000597626 612 ntTSL 5 BASIC8.84□□□□□ -0.99
P04436 AC063977.1-201ENST00000600623 371 ntBASIC8.84□□□□□ -0.99
P04436 HCG18-247ENST00000602698 573 ntTSL 3 BASIC8.84□□□□□ -0.99
P04436 CCL4L2-213ENST00000617405 846 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 AL512638.3-201ENST00000620370 298 ntBASIC8.84□□□□□ -0.99
P04436 AC001226.1-201ENST00000620512 539 ntBASIC8.84□□□□□ -0.99
P04436 AL356750.1-201ENST00000623911 2496 ntBASIC8.84□□□□□ -0.99
P04436 AC004696.2-201ENST00000624022 331 ntTSL 3 BASIC8.84□□□□□ -0.99
P04436 AP003500.1-201ENST00000626400 527 ntTSL 4 BASIC8.84□□□□□ -0.99
P04436 HFE2-207ENST00000636675 1280 ntTSL 5 BASIC8.84□□□□□ -0.99
P04436 FAM240B-201ENST00000637493 1160 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
P04436 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC8.84□□□□□ -0.99
P04436 DNM1P35-201ENST00000501931 3188 ntTSL 2 BASIC8.84□□□□□ -0.99
P04436 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC8.84□□□□□ -0.99
P04436 TIGIT-206ENST00000486257 3149 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
P04436 LINC01734-201ENST00000412672 1518 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 PTPN20-202ENST00000374339 1388 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 CSMD2-AS1-202ENST00000425631 1367 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P04436 AC009403.1-202ENST00000460022 1356 ntTSL 2 BASIC8.84□□□□□ -0.99
P04436 CHMP2B-203ENST00000471660 2528 ntTSL 2 BASIC8.84□□□□□ -0.99
P04436 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 CCT7P2-201ENST00000479109 1454 ntBASIC8.83□□□□□ -1
P04436 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 SLC35A4-202ENST00000514199 3617 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
P04436 TP53-205ENST00000445888 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 TP53-225ENST00000619485 2506 ntTSL 1 (best) BASIC8.83□□□□□ -1
P04436 SKA1-201ENST00000285116 2905 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
P04436 IL18RAP-201ENST00000264260 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 DGKI-213ENST00000614521 2799 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
P04436 AKAP10-202ENST00000395536 1815 ntTSL 5 BASIC8.83□□□□□ -1
P04436 SLC6A2-202ENST00000379906 3551 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 ESRRG-207ENST00000366940 5314 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 PCP4-201ENST00000328619 660 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 KRTDAP-201ENST00000338897 491 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 AL133343.1-201ENST00000375670 846 ntTSL 1 (best) BASIC8.83□□□□□ -1
P04436 LY6G6E-225ENST00000383418 383 ntAPPRIS P5 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 IGLV8-61-201ENST00000390283 414 ntAPPRIS P1 BASIC8.83□□□□□ -1
P04436 IGLV5-45-201ENST00000390296 397 ntAPPRIS P1 BASIC8.83□□□□□ -1
P04436 PPM1N-202ENST00000396736 527 ntTSL 5 BASIC8.83□□□□□ -1
P04436 KYNU-204ENST00000410015 776 ntTSL 2 BASIC8.83□□□□□ -1
P04436 RNA5SP158-201ENST00000410298 102 ntBASIC8.83□□□□□ -1
P04436 LINC02246-201ENST00000412426 991 ntTSL 5 BASIC8.83□□□□□ -1
P04436 LINC01090-201ENST00000415357 881 ntTSL 3 BASIC8.83□□□□□ -1
P04436 CYP4F62P-201ENST00000417310 524 ntBASIC8.83□□□□□ -1
P04436 AC145543.1-201ENST00000424770 586 ntTSL 5 BASIC8.83□□□□□ -1
P04436 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC8.83□□□□□ -1
P04436 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
P04436 LINC01823-203ENST00000435895 766 ntTSL 3 BASIC8.83□□□□□ -1
P04436 PHKG1P1-201ENST00000442924 614 ntBASIC8.83□□□□□ -1
P04436 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC8.83□□□□□ -1
P04436 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC8.83□□□□□ -1
P04436 KRTDAP-203ENST00000484218 451 ntTSL 2 BASIC8.83□□□□□ -1
P04436 HAVCR2-204ENST00000522593 975 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
P04436 TRAPPC4-206ENST00000525303 654 ntTSL 2 BASIC8.83□□□□□ -1
P04436 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC8.83□□□□□ -1
P04436 BOLA3P1-201ENST00000530713 355 ntBASIC8.83□□□□□ -1
P04436 BDNF-AS-209ENST00000532965 572 ntTSL 4 BASIC8.83□□□□□ -1
P04436 AP001189.4-201ENST00000533588 452 ntTSL 3 BASIC8.83□□□□□ -1
P04436 RAD52-217ENST00000544742 463 ntTSL 4 BASIC8.83□□□□□ -1
P04436 GABRB3-205ENST00000545868 1267 ntTSL 5 BASIC8.83□□□□□ -1
P04436 ZMYND19P1-201ENST00000554267 787 ntBASIC8.83□□□□□ -1
P04436 ELOCP2-201ENST00000566760 332 ntBASIC8.83□□□□□ -1
P04436 KARS-209ENST00000568378 459 ntTSL 5 BASIC8.83□□□□□ -1
P04436 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
P04436 MTND6P22-201ENST00000604233 521 ntBASIC8.83□□□□□ -1
P04436 SMARCE1P7-201ENST00000605515 485 ntBASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 411.2 ms