RNA–Protein interactions for RNA: ENST00000515826.1

TMEM108-211, Transcript of transmembrane protein 108, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM108, Length 4,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM108-211ENST00000515826 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
TMEM108-211ENST00000515826 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
TMEM108-211ENST00000515826 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
TMEM108-211ENST00000515826 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
TMEM108-211ENST00000515826 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
TMEM108-211ENST00000515826 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
TMEM108-211ENST00000515826 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
TMEM108-211ENST00000515826 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.05
TMEM108-211ENST00000515826 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.04
TMEM108-211ENST00000515826 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
TMEM108-211ENST00000515826 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
TMEM108-211ENST00000515826 NACADO15069 1562 aa15.19■□□□□ 0.02
TMEM108-211ENST00000515826 PCGF6Q9BYE7 350 aa15.14■□□□□ 0.01
TMEM108-211ENST00000515826 TRIM26Q12899 539 aaPredicted RBP15.11■□□□□ 0.01
TMEM108-211ENST00000515826 SCRIBQ14160 1630 aa15.08■□□□□ 0.01
TMEM108-211ENST00000515826 HRCP23327 699 aa15.08■□□□□ 0
TMEM108-211ENST00000515826 ABCC9O60706 1549 aa15.06■□□□□ 0
TMEM108-211ENST00000515826 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
TMEM108-211ENST00000515826 APLP2Q06481 763 aa14.97□□□□□ -0.01
TMEM108-211ENST00000515826 FAM9AQ8IZU1 332 aaPredicted RBP14.94□□□□□ -0.02
TMEM108-211ENST00000515826 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
TMEM108-211ENST00000515826 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
TMEM108-211ENST00000515826 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.05
TMEM108-211ENST00000515826 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
TMEM108-211ENST00000515826 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
TMEM108-211ENST00000515826 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
TMEM108-211ENST00000515826 EEA1Q15075 1411 aa14.68□□□□□ -0.06
TMEM108-211ENST00000515826 CENPBP07199 599 aaPredicted RBP14.62□□□□□ -0.07
TMEM108-211ENST00000515826 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
TMEM108-211ENST00000515826 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
TMEM108-211ENST00000515826 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
TMEM108-211ENST00000515826 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
TMEM108-211ENST00000515826 MYT1Q01538 1121 aa14.48□□□□□ -0.09
TMEM108-211ENST00000515826 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.1
TMEM108-211ENST00000515826 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
TMEM108-211ENST00000515826 GOLGA3Q08378 1498 aa14.39□□□□□ -0.11
TMEM108-211ENST00000515826 SMARCA4P51532 1647 aa14.38□□□□□ -0.11
TMEM108-211ENST00000515826 SMARCA2P51531 1590 aa14.37□□□□□ -0.11
TMEM108-211ENST00000515826 TNIKQ9UKE5 1360 aa14.37□□□□□ -0.11
TMEM108-211ENST00000515826 WIZO95785 1651 aa14.36□□□□□ -0.11
TMEM108-211ENST00000515826 BAZ1BQ9UIG0 1483 aaKnown RBP14.35□□□□□ -0.11
TMEM108-211ENST00000515826 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.12
TMEM108-211ENST00000515826 TTBK1Q5TCY1 1321 aaPredicted RBP14.32□□□□□ -0.12
TMEM108-211ENST00000515826 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
TMEM108-211ENST00000515826 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
TMEM108-211ENST00000515826 PPARGC1BQ86YN6 1023 aaKnown RBP14.28□□□□□ -0.12
TMEM108-211ENST00000515826 CEP162Q5TB80 1403 aa14.26□□□□□ -0.13
TMEM108-211ENST00000515826 RANGAP1P46060 587 aaPredicted RBP14.21□□□□□ -0.14
TMEM108-211ENST00000515826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
TMEM108-211ENST00000515826 CLIP1P30622 1438 aa14.18□□□□□ -0.14
TMEM108-211ENST00000515826 DIEXFQ68CQ4 756 aaKnown RBP14.17□□□□□ -0.14
TMEM108-211ENST00000515826 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
TMEM108-211ENST00000515826 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
TMEM108-211ENST00000515826 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
TMEM108-211ENST00000515826 ATAD2BQ9ULI0 1458 aa14.08□□□□□ -0.16
TMEM108-211ENST00000515826 ATP1B4Q9UN42 357 aaPredicted RBP14.08□□□□□ -0.16
TMEM108-211ENST00000515826 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
TMEM108-211ENST00000515826 CLSPNQ9HAW4 1339 aa14.05□□□□□ -0.16
TMEM108-211ENST00000515826 SOGA1O94964 1423 aa14.02□□□□□ -0.17
TMEM108-211ENST00000515826 VPS8Q8N3P4 1428 aa14.01□□□□□ -0.17
TMEM108-211ENST00000515826 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
TMEM108-211ENST00000515826 ACIN1Q9UKV3 1341 aaKnown RBP14□□□□□ -0.17
TMEM108-211ENST00000515826 KIF21BO75037 1637 aa13.99□□□□□ -0.17
TMEM108-211ENST00000515826 NEFLP07196 543 aa13.94□□□□□ -0.18
TMEM108-211ENST00000515826 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
TMEM108-211ENST00000515826 NCAPD3P42695 1498 aa13.9□□□□□ -0.18
TMEM108-211ENST00000515826 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
TMEM108-211ENST00000515826 ERICH3Q5RHP9 1530 aa13.88□□□□□ -0.19
TMEM108-211ENST00000515826 FAM50AQ14320 339 aaKnown RBP13.87□□□□□ -0.19
TMEM108-211ENST00000515826 YTHDC1Q96MU7 727 aaKnown RBP13.87□□□□□ -0.19
TMEM108-211ENST00000515826 UNC13AQ9UPW8 1703 aa13.86□□□□□ -0.19
TMEM108-211ENST00000515826 ITGAEP38570 1179 aa13.86□□□□□ -0.19
TMEM108-211ENST00000515826 EIF4G1Q04637 1599 aaKnown RBP13.86□□□□□ -0.19
TMEM108-211ENST00000515826 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
TMEM108-211ENST00000515826 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
TMEM108-211ENST00000515826 CUX2O14529 1486 aa13.78□□□□□ -0.2
TMEM108-211ENST00000515826 CADPSQ9ULU8 1353 aa13.78□□□□□ -0.2
TMEM108-211ENST00000515826 CARMIL1Q5VZK9 1371 aa13.77□□□□□ -0.21
TMEM108-211ENST00000515826 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
TMEM108-211ENST00000515826 RAPGEF2Q9Y4G8 1499 aa13.76□□□□□ -0.21
TMEM108-211ENST00000515826 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
TMEM108-211ENST00000515826 CDK11AQ9UQ88 783 aaPredicted RBP13.75□□□□□ -0.21
TMEM108-211ENST00000515826 CCNB3Q8WWL7 1395 aa13.74□□□□□ -0.21
TMEM108-211ENST00000515826 GTF3C3Q9Y5Q9 886 aa13.72□□□□□ -0.21
TMEM108-211ENST00000515826 CFTRP13569 1480 aa13.71□□□□□ -0.21
TMEM108-211ENST00000515826 ANP32CO43423 234 aa13.7□□□□□ -0.22
TMEM108-211ENST00000515826 RUSC2Q8N2Y8 1516 aa13.7□□□□□ -0.22
TMEM108-211ENST00000515826 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
TMEM108-211ENST00000515826 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
TMEM108-211ENST00000515826 FMN1Q68DA7 1419 aa13.68□□□□□ -0.22
TMEM108-211ENST00000515826 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
TMEM108-211ENST00000515826 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
TMEM108-211ENST00000515826 PRXQ9BXM0 1461 aa13.64□□□□□ -0.23
TMEM108-211ENST00000515826 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
TMEM108-211ENST00000515826 ARHGAP35Q9NRY4 1499 aa13.64□□□□□ -0.23
TMEM108-211ENST00000515826 TRIM52Q96A61 297 aa13.63□□□□□ -0.23
TMEM108-211ENST00000515826 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
TMEM108-211ENST00000515826 SETD5Q9C0A6 1442 aa13.62□□□□□ -0.23
TMEM108-211ENST00000515826 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
TMEM108-211ENST00000515826 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms