Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.53■□□□□ 0.72
CTSFQ9UBX1 AC073210.2-201ENST00000430369 194 ntBASIC19.53■□□□□ 0.72
CTSFQ9UBX1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 CD99P1-205ENST00000527459 561 ntBASIC19.53■□□□□ 0.72
CTSFQ9UBX1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 FAM21FP-204ENST00000608637 956 ntBASIC19.53■□□□□ 0.72
CTSFQ9UBX1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 AC092118.2-201ENST00000613495 667 ntBASIC19.52■□□□□ 0.72
CTSFQ9UBX1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.52■□□□□ 0.72
CTSFQ9UBX1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTSFQ9UBX1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CTSFQ9UBX1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.52■□□□□ 0.71
CTSFQ9UBX1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTSFQ9UBX1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTSFQ9UBX1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 KRT18P6-201ENST00000555540 1265 ntBASIC19.51■□□□□ 0.71
CTSFQ9UBX1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 AC244015.2-201ENST00000616358 1861 ntBASIC19.51■□□□□ 0.71
CTSFQ9UBX1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSFQ9UBX1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSFQ9UBX1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.49■□□□□ 0.71
CTSFQ9UBX1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 AC007322.3-201ENST00000426526 701 ntBASIC19.49■□□□□ 0.71
CTSFQ9UBX1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSFQ9UBX1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms