Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 AC231657.2-201ENST00000624556 255 ntBASIC17.5■□□□□ 0.39
RNF7Q9UBF6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF7Q9UBF6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF7Q9UBF6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF7Q9UBF6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF7Q9UBF6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF7Q9UBF6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF7Q9UBF6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF7Q9UBF6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 AC007322.1-201ENST00000426983 750 ntBASIC17.48■□□□□ 0.39
RNF7Q9UBF6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF7Q9UBF6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 AC007322.4-201ENST00000509611 723 ntBASIC17.47■□□□□ 0.39
RNF7Q9UBF6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF7Q9UBF6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.46■□□□□ 0.39
RNF7Q9UBF6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 AC091799.1-201ENST00000422823 811 ntBASIC17.46■□□□□ 0.39
RNF7Q9UBF6 CDV3P1-201ENST00000471403 739 ntBASIC17.46■□□□□ 0.39
RNF7Q9UBF6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 AL591742.1-201ENST00000604433 565 ntBASIC17.46■□□□□ 0.39
RNF7Q9UBF6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 AC073111.5-205ENST00000641717 521 ntBASIC17.46■□□□□ 0.39
RNF7Q9UBF6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF7Q9UBF6 AC007375.3-201ENST00000600936 2314 ntBASIC17.46■□□□□ 0.38
RNF7Q9UBF6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.45■□□□□ 0.38
RNF7Q9UBF6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 AF106564.1-201ENST00000607058 2553 ntBASIC17.45■□□□□ 0.38
RNF7Q9UBF6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF7Q9UBF6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF7Q9UBF6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms