Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 AC006128.1-201ENST00000624704 1661 ntBASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 AC142381.2-201ENST00000566120 298 ntBASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 AL358852.1-201ENST00000623174 1268 ntBASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 AC121338.2-201ENST00000622535 1744 ntBASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 AC053503.5-201ENST00000601508 636 ntBASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
KCNIP1Q9NZI2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 SUDS3P1-201ENST00000505831 966 ntBASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 AL031432.3-201ENST00000607698 485 ntBASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KCNIP1Q9NZI2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNIP1Q9NZI2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.33■□□□□ 0.37
KCNIP1Q9NZI2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
KCNIP1Q9NZI2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNIP1Q9NZI2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNIP1Q9NZI2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
KCNIP1Q9NZI2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNIP1Q9NZI2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNIP1Q9NZI2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNIP1Q9NZI2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms