Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.73■□□□□ 0.75
PIF1Q9H611 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PIF1Q9H611 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.73■□□□□ 0.75
PIF1Q9H611 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.73■□□□□ 0.75
PIF1Q9H611 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PIF1Q9H611 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PIF1Q9H611 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PIF1Q9H611 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIF1Q9H611 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.73■□□□□ 0.75
PIF1Q9H611 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PIF1Q9H611 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.73■□□□□ 0.75
PIF1Q9H611 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.73■□□□□ 0.75
PIF1Q9H611 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.73■□□□□ 0.75
PIF1Q9H611 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.72■□□□□ 0.75
PIF1Q9H611 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PIF1Q9H611 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.72■□□□□ 0.75
PIF1Q9H611 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PIF1Q9H611 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PIF1Q9H611 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.72■□□□□ 0.75
PIF1Q9H611 SMUG1P1-201ENST00000590640 811 ntBASIC19.72■□□□□ 0.75
PIF1Q9H611 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.72■□□□□ 0.75
PIF1Q9H611 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIF1Q9H611 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PIF1Q9H611 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
PIF1Q9H611 AC007952.6-201ENST00000573168 2673 ntBASIC19.71■□□□□ 0.75
PIF1Q9H611 AC003957.1-201ENST00000625108 2673 ntBASIC19.71■□□□□ 0.75
PIF1Q9H611 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.71■□□□□ 0.75
PIF1Q9H611 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.71■□□□□ 0.75
PIF1Q9H611 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PIF1Q9H611 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.71■□□□□ 0.75
PIF1Q9H611 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.71■□□□□ 0.75
PIF1Q9H611 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PIF1Q9H611 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PIF1Q9H611 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.71■□□□□ 0.75
PIF1Q9H611 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.71■□□□□ 0.75
PIF1Q9H611 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIF1Q9H611 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIF1Q9H611 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIF1Q9H611 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIF1Q9H611 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.7■□□□□ 0.74
PIF1Q9H611 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PIF1Q9H611 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PIF1Q9H611 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIF1Q9H611 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.7■□□□□ 0.74
PIF1Q9H611 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIF1Q9H611 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PIF1Q9H611 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.7■□□□□ 0.74
PIF1Q9H611 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.7■□□□□ 0.74
PIF1Q9H611 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
PIF1Q9H611 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.7■□□□□ 0.74
PIF1Q9H611 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.7■□□□□ 0.74
PIF1Q9H611 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.7■□□□□ 0.74
PIF1Q9H611 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PIF1Q9H611 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PIF1Q9H611 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.7■□□□□ 0.74
PIF1Q9H611 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIF1Q9H611 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.7■□□□□ 0.74
PIF1Q9H611 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIF1Q9H611 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIF1Q9H611 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.7■□□□□ 0.74
PIF1Q9H611 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 RNF165-205ENST00000588679 2904 ntBASIC19.69■□□□□ 0.74
PIF1Q9H611 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.69■□□□□ 0.74
PIF1Q9H611 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.69■□□□□ 0.74
PIF1Q9H611 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.69■□□□□ 0.74
PIF1Q9H611 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
PIF1Q9H611 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.69■□□□□ 0.74
PIF1Q9H611 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PIF1Q9H611 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIF1Q9H611 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PIF1Q9H611 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms