Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
VPS11Q9H270 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS11Q9H270 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VPS11Q9H270 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.81■□□□□ 0.92
VPS11Q9H270 AC009237.3-201ENST00000393279 1427 ntBASIC20.81■□□□□ 0.92
VPS11Q9H270 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VPS11Q9H270 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.81■□□□□ 0.92
VPS11Q9H270 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
VPS11Q9H270 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.81■□□□□ 0.92
VPS11Q9H270 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.81■□□□□ 0.92
VPS11Q9H270 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VPS11Q9H270 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS11Q9H270 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS11Q9H270 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS11Q9H270 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VPS11Q9H270 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS11Q9H270 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS11Q9H270 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.81■□□□□ 0.92
VPS11Q9H270 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
VPS11Q9H270 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 AC008764.7-201ENST00000593779 1081 ntBASIC20.8■□□□□ 0.92
VPS11Q9H270 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS11Q9H270 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS11Q9H270 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS11Q9H270 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS11Q9H270 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS11Q9H270 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.8■□□□□ 0.92
VPS11Q9H270 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.8■□□□□ 0.92
VPS11Q9H270 AC027702.1-201ENST00000563810 1770 ntBASIC20.8■□□□□ 0.92
VPS11Q9H270 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS11Q9H270 AC135279.3-201ENST00000610945 1311 ntBASIC20.79■□□□□ 0.92
VPS11Q9H270 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS11Q9H270 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS11Q9H270 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS11Q9H270 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS11Q9H270 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS11Q9H270 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS11Q9H270 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.79■□□□□ 0.92
VPS11Q9H270 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS11Q9H270 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
VPS11Q9H270 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS11Q9H270 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS11Q9H270 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VPS11Q9H270 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VPS11Q9H270 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VPS11Q9H270 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VPS11Q9H270 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.78■□□□□ 0.92
VPS11Q9H270 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS11Q9H270 AC055733.4-201ENST00000638462 1354 ntBASIC20.78■□□□□ 0.92
VPS11Q9H270 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.78■□□□□ 0.92
VPS11Q9H270 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.78■□□□□ 0.92
VPS11Q9H270 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
VPS11Q9H270 AFG3L1P-217ENST00000557444 2447 ntBASIC20.78■□□□□ 0.92
VPS11Q9H270 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS11Q9H270 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS11Q9H270 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VPS11Q9H270 AL391422.3-201ENST00000603791 2761 ntBASIC20.78■□□□□ 0.92
VPS11Q9H270 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS11Q9H270 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VPS11Q9H270 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VPS11Q9H270 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
VPS11Q9H270 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
VPS11Q9H270 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
VPS11Q9H270 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS11Q9H270 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS11Q9H270 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS11Q9H270 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS11Q9H270 AC020907.5-201ENST00000624372 1936 ntBASIC20.77■□□□□ 0.92
VPS11Q9H270 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
VPS11Q9H270 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS11Q9H270 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VPS11Q9H270 AC105233.4-201ENST00000642045 216 ntBASIC20.77■□□□□ 0.92
VPS11Q9H270 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VPS11Q9H270 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS11Q9H270 AC121338.2-201ENST00000622535 1744 ntBASIC20.77■□□□□ 0.92
VPS11Q9H270 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS11Q9H270 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS11Q9H270 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
VPS11Q9H270 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VPS11Q9H270 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS11Q9H270 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.76■□□□□ 0.91
VPS11Q9H270 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms