Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 EEF1DP3-203ENST00000566025 782 ntBASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NUCKS1Q9H1E3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 AC007225.1-201ENST00000566331 1836 ntBASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 AC073314.1-201ENST00000568729 2216 ntBASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NUCKS1Q9H1E3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NUCKS1Q9H1E3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 AP004607.4-201ENST00000530158 1459 ntBASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.41■■□□□ 1.18
NUCKS1Q9H1E3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 MIR5787-201ENST00000611784 55 ntBASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NUCKS1Q9H1E3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NUCKS1Q9H1E3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NUCKS1Q9H1E3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
NUCKS1Q9H1E3 AC092667.1-201ENST00000434301 2586 ntBASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 AC123595.1-201ENST00000440769 1046 ntBASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms