Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 GUSBP5-201ENST00000418136 578 ntBASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 AC098799.1-201ENST00000504752 800 ntBASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 GRAMD4P7-201ENST00000578182 1232 ntBASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 RN7SL602P-201ENST00000578326 324 ntBASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 AC011484.1-201ENST00000377652 1995 ntBASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-1Q9BYR8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 TCF3P1-201ENST00000423021 1937 ntBASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 DUX4L19-201ENST00000557448 1267 ntBASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 AC125437.2-201ENST00000625180 2167 ntBASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-1Q9BYR8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 SMG8-203ENST00000578922 2178 ntBASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms