Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
CCDC97Q96F63 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC97Q96F63 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC97Q96F63 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC97Q96F63 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC97Q96F63 AC137761.2-201ENST00000561729 223 ntBASIC21.05■□□□□ 0.96
CCDC97Q96F63 AC145350.3-201ENST00000569033 163 ntBASIC21.05■□□□□ 0.96
CCDC97Q96F63 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC97Q96F63 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC97Q96F63 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC97Q96F63 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC97Q96F63 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC97Q96F63 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC97Q96F63 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC97Q96F63 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC97Q96F63 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC97Q96F63 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC97Q96F63 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC97Q96F63 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC97Q96F63 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC97Q96F63 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC97Q96F63 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC97Q96F63 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC97Q96F63 AC006015.1-201ENST00000429970 570 ntBASIC21.04■□□□□ 0.96
CCDC97Q96F63 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC97Q96F63 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC97Q96F63 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC97Q96F63 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC97Q96F63 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC97Q96F63 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC97Q96F63 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC97Q96F63 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC97Q96F63 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC97Q96F63 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC97Q96F63 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC97Q96F63 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC97Q96F63 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC97Q96F63 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC97Q96F63 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC97Q96F63 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CCDC97Q96F63 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC97Q96F63 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC97Q96F63 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC97Q96F63 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC97Q96F63 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC97Q96F63 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC97Q96F63 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC97Q96F63 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC97Q96F63 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC97Q96F63 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC97Q96F63 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC97Q96F63 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC97Q96F63 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC97Q96F63 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC97Q96F63 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC97Q96F63 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC97Q96F63 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC97Q96F63 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC97Q96F63 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC97Q96F63 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC97Q96F63 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC97Q96F63 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC97Q96F63 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCDC97Q96F63 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21■□□□□ 0.95
CCDC97Q96F63 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21■□□□□ 0.95
CCDC97Q96F63 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC97Q96F63 AC079140.4-201ENST00000507448 529 ntBASIC21■□□□□ 0.95
CCDC97Q96F63 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 AC004854.2-201ENST00000608450 1441 ntBASIC21■□□□□ 0.95
CCDC97Q96F63 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC97Q96F63 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms