Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM11Q96F44 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM11Q96F44 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM11Q96F44 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM11Q96F44 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM11Q96F44 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM11Q96F44 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM11Q96F44 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM11Q96F44 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.9■■□□□ 1.1
TRIM11Q96F44 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
TRIM11Q96F44 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM11Q96F44 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM11Q96F44 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM11Q96F44 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM11Q96F44 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM11Q96F44 AC104187.1-201ENST00000607510 612 ntBASIC21.9■■□□□ 1.1
TRIM11Q96F44 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM11Q96F44 AL157384.1-201ENST00000445995 2473 ntBASIC21.9■■□□□ 1.1
TRIM11Q96F44 AC007225.1-201ENST00000566331 1836 ntBASIC21.9■■□□□ 1.1
TRIM11Q96F44 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM11Q96F44 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.89■■□□□ 1.1
TRIM11Q96F44 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM11Q96F44 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM11Q96F44 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM11Q96F44 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM11Q96F44 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM11Q96F44 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM11Q96F44 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM11Q96F44 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM11Q96F44 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM11Q96F44 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM11Q96F44 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM11Q96F44 GABARAPL3-202ENST00000624044 1851 ntBASIC21.88■■□□□ 1.09
TRIM11Q96F44 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 KRT18P20-201ENST00000548986 1279 ntBASIC21.88■■□□□ 1.09
TRIM11Q96F44 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM11Q96F44 AP001160.3-201ENST00000601484 763 ntBASIC21.88■■□□□ 1.09
TRIM11Q96F44 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 RARRES2P11-201ENST00000635158 484 ntBASIC21.88■■□□□ 1.09
TRIM11Q96F44 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM11Q96F44 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM11Q96F44 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRIM11Q96F44 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM11Q96F44 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
TRIM11Q96F44 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM11Q96F44 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
TRIM11Q96F44 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.87■■□□□ 1.09
TRIM11Q96F44 CCDC92B-201ENST00000575506 885 ntBASIC21.87■■□□□ 1.09
TRIM11Q96F44 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM11Q96F44 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM11Q96F44 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TRIM11Q96F44 AP005212.1-201ENST00000581547 1997 ntBASIC21.87■■□□□ 1.09
TRIM11Q96F44 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM11Q96F44 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM11Q96F44 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM11Q96F44 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
TRIM11Q96F44 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM11Q96F44 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM11Q96F44 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TRIM11Q96F44 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM11Q96F44 KRT18P14-201ENST00000534205 1250 ntBASIC21.86■■□□□ 1.09
TRIM11Q96F44 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.86■■□□□ 1.09
TRIM11Q96F44 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM11Q96F44 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM11Q96F44 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM11Q96F44 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM11Q96F44 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM11Q96F44 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM11Q96F44 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
TRIM11Q96F44 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TRIM11Q96F44 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM11Q96F44 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM11Q96F44 LINC01006-201ENST00000333319 2292 ntBASIC21.85■■□□□ 1.09
TRIM11Q96F44 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM11Q96F44 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms