Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 RARRES2P1-201ENST00000474487 481 ntBASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 KRT125P-201ENST00000546827 989 ntBASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 AC099791.2-201ENST00000605725 427 ntBASIC20.58■□□□□ 0.89
CKAP2Q8WWK9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CKAP2Q8WWK9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKAP2Q8WWK9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 MIR4787-201ENST00000607364 84 ntBASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CKAP2Q8WWK9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 AC125437.2-201ENST00000625180 2167 ntBASIC20.55■□□□□ 0.88
CKAP2Q8WWK9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.54■□□□□ 0.88
CKAP2Q8WWK9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CKAP2Q8WWK9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms