Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 LINC00565-201ENST00000562710 2331 ntBASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI1Q7Z5J4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 AC128676.1-201ENST00000454392 318 ntBASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 AC245052.3-201ENST00000450182 901 ntBASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 UNC93B4-201ENST00000505679 747 ntBASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 PNMA6B-201ENST00000538162 1200 ntBASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI1Q7Z5J4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAI1Q7Z5J4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAI1Q7Z5J4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.77■□□□□ 0.43
RAI1Q7Z5J4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAI1Q7Z5J4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 LSM12P1-201ENST00000411836 588 ntBASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.76■□□□□ 0.43
RAI1Q7Z5J4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 MCRIP2P1-201ENST00000394346 511 ntBASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 AL359736.2-201ENST00000621992 437 ntBASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI1Q7Z5J4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms