Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC32■■■□□ 2.71
CD109Q6YHK3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC32■■■□□ 2.71
CD109Q6YHK3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC32■■■□□ 2.71
CD109Q6YHK3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CD109Q6YHK3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC32■■■□□ 2.71
CD109Q6YHK3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
CD109Q6YHK3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC32■■■□□ 2.71
CD109Q6YHK3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CD109Q6YHK3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CD109Q6YHK3 AC020928.2-201ENST00000588717 2197 ntBASIC31.99■■■□□ 2.71
CD109Q6YHK3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CD109Q6YHK3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.99■■■□□ 2.71
CD109Q6YHK3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC31.99■■■□□ 2.71
CD109Q6YHK3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC31.99■■■□□ 2.71
CD109Q6YHK3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC31.99■■■□□ 2.71
CD109Q6YHK3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC31.99■■■□□ 2.71
CD109Q6YHK3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.99■■■□□ 2.71
CD109Q6YHK3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC31.99■■■□□ 2.71
CD109Q6YHK3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CD109Q6YHK3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CD109Q6YHK3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CD109Q6YHK3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CD109Q6YHK3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.98■■■□□ 2.71
CD109Q6YHK3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC31.98■■■□□ 2.71
CD109Q6YHK3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.98■■■□□ 2.71
CD109Q6YHK3 AP003071.4-201ENST00000562276 1284 ntBASIC31.98■■■□□ 2.71
CD109Q6YHK3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC31.98■■■□□ 2.71
CD109Q6YHK3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CD109Q6YHK3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC31.98■■■□□ 2.71
CD109Q6YHK3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CD109Q6YHK3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
CD109Q6YHK3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC31.97■■■□□ 2.71
CD109Q6YHK3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CD109Q6YHK3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.97■■■□□ 2.71
CD109Q6YHK3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CD109Q6YHK3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
CD109Q6YHK3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC31.97■■■□□ 2.71
CD109Q6YHK3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC31.97■■■□□ 2.71
CD109Q6YHK3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC31.97■■■□□ 2.71
CD109Q6YHK3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CD109Q6YHK3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CD109Q6YHK3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC31.96■■■□□ 2.71
CD109Q6YHK3 MMP23A-201ENST00000234610 1017 ntBASIC31.96■■■□□ 2.71
CD109Q6YHK3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CD109Q6YHK3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC31.96■■■□□ 2.71
CD109Q6YHK3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CD109Q6YHK3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CD109Q6YHK3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
CD109Q6YHK3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
CD109Q6YHK3 AC145285.6-201ENST00000604632 637 ntBASIC31.95■■■□□ 2.71
CD109Q6YHK3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CD109Q6YHK3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.95■■■□□ 2.7
CD109Q6YHK3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
CD109Q6YHK3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.95■■■□□ 2.7
CD109Q6YHK3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CD109Q6YHK3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CD109Q6YHK3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC31.94■■■□□ 2.7
CD109Q6YHK3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CD109Q6YHK3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC31.93■■■□□ 2.7
CD109Q6YHK3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC31.93■■■□□ 2.7
CD109Q6YHK3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC31.93■■■□□ 2.7
CD109Q6YHK3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
CD109Q6YHK3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
CD109Q6YHK3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CD109Q6YHK3 AC087742.1-201ENST00000575880 1738 ntBASIC31.93■■■□□ 2.7
CD109Q6YHK3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CD109Q6YHK3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CD109Q6YHK3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CD109Q6YHK3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CD109Q6YHK3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC31.92■■■□□ 2.7
CD109Q6YHK3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
CD109Q6YHK3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC31.92■■■□□ 2.7
CD109Q6YHK3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC31.92■■■□□ 2.7
CD109Q6YHK3 MIR6786-201ENST00000616843 113 ntBASIC31.92■■■□□ 2.7
CD109Q6YHK3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CD109Q6YHK3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CD109Q6YHK3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
CD109Q6YHK3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
CD109Q6YHK3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CD109Q6YHK3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
CD109Q6YHK3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CD109Q6YHK3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC31.91■■■□□ 2.7
CD109Q6YHK3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CD109Q6YHK3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
CD109Q6YHK3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC31.91■■■□□ 2.7
CD109Q6YHK3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC31.91■■■□□ 2.7
CD109Q6YHK3 AC005829.2-201ENST00000571422 1056 ntBASIC31.91■■■□□ 2.7
CD109Q6YHK3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.91■■■□□ 2.7
CD109Q6YHK3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC31.9■■■□□ 2.7
CD109Q6YHK3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CD109Q6YHK3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CD109Q6YHK3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC31.9■■■□□ 2.7
CD109Q6YHK3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CD109Q6YHK3 NME3-204ENST00000563498 920 ntTSL 2 BASIC31.9■■■□□ 2.7
CD109Q6YHK3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CD109Q6YHK3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CD109Q6YHK3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CD109Q6YHK3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC31.89■■■□□ 2.7
CD109Q6YHK3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
CD109Q6YHK3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC31.89■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms