Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 BX842568.3-201ENST00000418104 571 ntBASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.69■□□□□ 0.58
LCN1P1Q5VSP4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 AC009237.3-201ENST00000393279 1427 ntBASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.68■□□□□ 0.58
LCN1P1Q5VSP4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 AC131281.2-201ENST00000520478 145 ntBASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.67■□□□□ 0.58
LCN1P1Q5VSP4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 AC121338.2-201ENST00000622535 1744 ntBASIC18.66■□□□□ 0.58
LCN1P1Q5VSP4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCN1P1Q5VSP4 AP005212.1-201ENST00000581547 1997 ntBASIC18.64■□□□□ 0.58
LCN1P1Q5VSP4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.64■□□□□ 0.58
LCN1P1Q5VSP4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LCN1P1Q5VSP4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms