Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 AC116050.2-201ENST00000612102 1779 ntBASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 AC092368.3-202ENST00000574180 1591 ntBASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 AC008403.3-201ENST00000598924 454 ntBASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 AC012676.1-201ENST00000574705 1949 ntBASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.6■□□□□ 0.57
KRTCAP3Q53RY4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRTCAP3Q53RY4 CYP21A1P-202ENST00000354927 1481 ntBASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KRTCAP3Q53RY4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.58■□□□□ 0.56
KRTCAP3Q53RY4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
KRTCAP3Q53RY4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.56■□□□□ 0.56
KRTCAP3Q53RY4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms