Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.01■■□□□ 1.59
PDS5AQ29RF7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PDS5AQ29RF7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PDS5AQ29RF7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25■■□□□ 1.59
PDS5AQ29RF7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PDS5AQ29RF7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
PDS5AQ29RF7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDS5AQ29RF7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDS5AQ29RF7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25■■□□□ 1.59
PDS5AQ29RF7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25■■□□□ 1.59
PDS5AQ29RF7 POU5F1P3-201ENST00000428824 1078 ntBASIC25■■□□□ 1.59
PDS5AQ29RF7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
PDS5AQ29RF7 NME6-213ENST00000451657 871 ntTSL 2 BASIC25■■□□□ 1.59
PDS5AQ29RF7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PDS5AQ29RF7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PDS5AQ29RF7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 AC105020.6-201ENST00000621523 1217 ntBASIC24.99■■□□□ 1.59
PDS5AQ29RF7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PDS5AQ29RF7 AC087633.2-202ENST00000565166 1439 ntBASIC24.99■■□□□ 1.59
PDS5AQ29RF7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDS5AQ29RF7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.97■■□□□ 1.59
PDS5AQ29RF7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 FAM201B-201ENST00000458407 597 ntBASIC24.96■■□□□ 1.59
PDS5AQ29RF7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
PDS5AQ29RF7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PDS5AQ29RF7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.59
PDS5AQ29RF7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms