Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPXP78539 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPXP78539 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SRPXP78539 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SRPXP78539 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPXP78539 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SRPXP78539 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPXP78539 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SRPXP78539 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPXP78539 AL162377.1-201ENST00000618844 1793 ntBASIC17.05■□□□□ 0.32
SRPXP78539 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SRPXP78539 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.05■□□□□ 0.32
SRPXP78539 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SRPXP78539 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SRPXP78539 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPXP78539 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.05■□□□□ 0.32
SRPXP78539 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 AC010525.1-201ENST00000585559 441 ntBASIC17.05■□□□□ 0.32
SRPXP78539 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPXP78539 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.05■□□□□ 0.32
SRPXP78539 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SRPXP78539 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SRPXP78539 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPXP78539 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.05■□□□□ 0.32
SRPXP78539 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPXP78539 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPXP78539 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPXP78539 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SRPXP78539 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.04■□□□□ 0.32
SRPXP78539 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPXP78539 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPXP78539 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SRPXP78539 AL391422.3-201ENST00000603791 2761 ntBASIC17.04■□□□□ 0.32
SRPXP78539 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SRPXP78539 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRPXP78539 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.04■□□□□ 0.32
SRPXP78539 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRPXP78539 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.04■□□□□ 0.32
SRPXP78539 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SRPXP78539 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPXP78539 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SRPXP78539 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SRPXP78539 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPXP78539 AFG3L1P-217ENST00000557444 2447 ntBASIC17.04■□□□□ 0.32
SRPXP78539 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.03■□□□□ 0.32
SRPXP78539 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.03■□□□□ 0.32
SRPXP78539 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SRPXP78539 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SRPXP78539 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SRPXP78539 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.03■□□□□ 0.32
SRPXP78539 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.03■□□□□ 0.32
SRPXP78539 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.03■□□□□ 0.32
SRPXP78539 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.03■□□□□ 0.32
SRPXP78539 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.03■□□□□ 0.32
SRPXP78539 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SRPXP78539 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.03■□□□□ 0.32
SRPXP78539 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
SRPXP78539 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPXP78539 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRPXP78539 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SRPXP78539 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRPXP78539 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms