Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.57■□□□□ 0.56
CLDN18P56856 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN18P56856 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN18P56856 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN18P56856 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN18P56856 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN18P56856 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN18P56856 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN18P56856 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN18P56856 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN18P56856 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLDN18P56856 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN18P56856 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN18P56856 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN18P56856 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN18P56856 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.56■□□□□ 0.56
CLDN18P56856 AC116050.2-201ENST00000612102 1779 ntBASIC18.56■□□□□ 0.56
CLDN18P56856 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN18P56856 BX276092.2-201ENST00000417668 665 ntBASIC18.56■□□□□ 0.56
CLDN18P56856 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN18P56856 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN18P56856 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN18P56856 AC098934.4-201ENST00000564127 592 ntBASIC18.56■□□□□ 0.56
CLDN18P56856 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN18P56856 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN18P56856 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLDN18P56856 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN18P56856 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN18P56856 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.55■□□□□ 0.56
CLDN18P56856 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN18P56856 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN18P56856 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN18P56856 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLDN18P56856 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN18P56856 MIR4758-201ENST00000577688 71 ntBASIC18.55■□□□□ 0.56
CLDN18P56856 AC092118.2-201ENST00000613495 667 ntBASIC18.55■□□□□ 0.56
CLDN18P56856 AC100791.3-201ENST00000617619 330 ntBASIC18.55■□□□□ 0.56
CLDN18P56856 AC133041.1-202ENST00000642053 222 ntBASIC18.55■□□□□ 0.56
CLDN18P56856 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN18P56856 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN18P56856 AC079834.2-201ENST00000609776 1949 ntBASIC18.55■□□□□ 0.56
CLDN18P56856 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN18P56856 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLDN18P56856 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN18P56856 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN18P56856 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN18P56856 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN18P56856 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN18P56856 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN18P56856 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN18P56856 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.54■□□□□ 0.56
CLDN18P56856 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN18P56856 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.54■□□□□ 0.56
CLDN18P56856 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN18P56856 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CLDN18P56856 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN18P56856 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN18P56856 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN18P56856 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN18P56856 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN18P56856 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN18P56856 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLDN18P56856 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN18P56856 LINC00565-201ENST00000562710 2331 ntBASIC18.54■□□□□ 0.56
CLDN18P56856 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN18P56856 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN18P56856 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLDN18P56856 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN18P56856 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN18P56856 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN18P56856 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.53■□□□□ 0.56
CLDN18P56856 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN18P56856 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN18P56856 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN18P56856 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN18P56856 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN18P56856 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN18P56856 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.53■□□□□ 0.56
CLDN18P56856 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN18P56856 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN18P56856 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLDN18P56856 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN18P56856 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN18P56856 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN18P56856 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN18P56856 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN18P56856 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN18P56856 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN18P56856 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN18P56856 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN18P56856 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms