Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 COPZ1-209ENST00000550171 1026 ntTSL 26.94□□□□□ -1.39e-13■■■■□ 22.9
SUB1P53999 COPZ1-210ENST00000550713 548 ntTSL 26.56□□□□□ -1.369e-13■■■■□ 22.9
SUB1P53999 COPZ1-211ENST00000551412 548 ntTSL 26.53□□□□□ -1.369e-13■■■■□ 22.9
SUB1P53999 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC6.34□□□□□ -1.399e-13■■■■□ 22.9
SUB1P53999 COPZ1-208ENST00000550027 553 ntTSL 1 (best)6.15□□□□□ -1.429e-13■■■■□ 22.9
SUB1P53999 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC4.76□□□□□ -1.659e-13■■■■□ 22.9
SUB1P53999 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC4.76□□□□□ -1.659e-13■■■■□ 22.9
SUB1P53999 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.394e-7■■■■□ 22.9
SUB1P53999 MTCH2-206ENST00000539759 581 ntTSL 53.77□□□□□ -1.814e-7■■■■□ 22.9
SUB1P53999 TBCD-218ENST00000575132 707 ntTSL 511.06□□□□□ -0.643e-6■■■■□ 22.9
SUB1P53999 RAN-205ENST00000477395 762 ntTSL 513.16□□□□□ -0.31e-18■■■■□ 22.9
SUB1P53999 RAN-207ENST00000536606 572 ntTSL 36.76□□□□□ -1.331e-18■■■■□ 22.9
SUB1P53999 RAN-204ENST00000464211 562 ntTSL 55.96□□□□□ -1.461e-18■■■■□ 22.9
SUB1P53999 RAN-206ENST00000535090 657 ntTSL 53.92□□□□□ -1.781e-18■■■■□ 22.9
SUB1P53999 VARS2-209ENST00000477288 6054 ntTSL 217.04■□□□□ 0.323e-6■■■■□ 22.9
SUB1P53999 USP5-204ENST00000537267 2522 ntTSL 511.52□□□□□ -0.563e-10■■■■□ 22.9
SUB1P53999 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.73e-10■■■■□ 22.9
SUB1P53999 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.863e-10■■■■□ 22.9
SUB1P53999 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.871e-8■■■■□ 22.8
SUB1P53999 ACTR1A-205ENST00000487599 2726 ntTSL 5 BASIC9.16□□□□□ -0.941e-8■■■■□ 22.8
SUB1P53999 ACTR1A-207ENST00000636707 1046 ntTSL 58.28□□□□□ -1.081e-8■■■■□ 22.8
SUB1P53999 ACTR1A-202ENST00000470322 3519 ntTSL 27.69□□□□□ -1.181e-8■■■■□ 22.8
SUB1P53999 DAD1-202ENST00000489532 339 ntTSL 31.27□□□□□ -2.213e-8■■■■□ 22.8
SUB1P53999 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.692e-6■■■■□ 22.8
SUB1P53999 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.499e-7■■■■□ 22.8
SUB1P53999 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.169e-7■■■■□ 22.8
SUB1P53999 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.12■□□□□ 0.492e-6■■■■□ 22.8
SUB1P53999 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.99□□□□□ -0.172e-6■■■■□ 22.8
SUB1P53999 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.432e-6■■■■□ 22.8
SUB1P53999 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.66■■□□□ 1.061e-12■■■■□ 22.8
SUB1P53999 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.761e-12■■■■□ 22.8
SUB1P53999 CPNE1-204ENST00000397443 1928 ntAPPRIS P1 TSL 516.68■□□□□ 0.261e-12■■■■□ 22.8
SUB1P53999 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.78□□□□□ -0.049e-7■■■■□ 22.8
SUB1P53999 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.099e-7■■■■□ 22.8
SUB1P53999 CPNE1-224ENST00000483359 1975 ntTSL 513.79□□□□□ -0.21e-12■■■■□ 22.8
SUB1P53999 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.73□□□□□ -0.219e-7■■■■□ 22.8
SUB1P53999 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.419e-7■■■■□ 22.8
SUB1P53999 CPNE1-228ENST00000498814 550 ntTSL 311.97□□□□□ -0.491e-12■■■■□ 22.8
SUB1P53999 CPNE1-225ENST00000483495 1853 ntTSL 510.62□□□□□ -0.711e-12■■■■□ 22.8
SUB1P53999 CPNE1-209ENST00000415920 731 ntTSL 510.59□□□□□ -0.711e-12■■■■□ 22.8
SUB1P53999 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC10.24□□□□□ -0.771e-12■■■■□ 22.8
SUB1P53999 CPNE1-221ENST00000462352 625 ntTSL 29.11□□□□□ -0.951e-12■■■■□ 22.8
SUB1P53999 CPNE1-222ENST00000473373 821 ntTSL 28.75□□□□□ -1.011e-12■■■■□ 22.8
SUB1P53999 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.282e-6■■■■□ 22.8
SUB1P53999 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.491e-6■■■■□ 22.8
SUB1P53999 GDI1-214ENST00000491154 4069 ntTSL 28.31□□□□□ -1.081e-6■■■■□ 22.8
SUB1P53999 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.26□□□□□ -0.455e-26■■■■□ 22.8
SUB1P53999 UBC-209ENST00000541272 582 ntTSL 58.37□□□□□ -1.073e-9■■■■□ 22.8
SUB1P53999 B2M-201ENST00000349264 732 ntTSL 35.01□□□□□ -1.614e-10■■■■□ 22.7
SUB1P53999 MARS-205ENST00000546481 561 ntTSL 317.33■□□□□ 0.369e-12■■■■□ 22.7
SUB1P53999 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.34■□□□□ 0.059e-12■■■■□ 22.7
SUB1P53999 MARS-207ENST00000547062 571 ntTSL 215.31■□□□□ 0.049e-12■■■■□ 22.7
SUB1P53999 MARS-214ENST00000548714 567 ntTSL 215.17■□□□□ 0.029e-12■■■■□ 22.7
SUB1P53999 MARS-225ENST00000551842 662 ntTSL 214.12□□□□□ -0.159e-12■■■■□ 22.7
SUB1P53999 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.356e-7■■■■□ 22.7
SUB1P53999 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.27□□□□□ -0.616e-7■■■■□ 22.7
SUB1P53999 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.716e-7■■■■□ 22.7
SUB1P53999 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.766e-7■■■■□ 22.7
SUB1P53999 PHB-206ENST00000504124 796 ntTSL 59.55□□□□□ -0.886e-7■■■■□ 22.7
SUB1P53999 PHB-202ENST00000393345 847 ntTSL 27.68□□□□□ -1.186e-7■■■■□ 22.7
SUB1P53999 PHB-204ENST00000434917 534 ntTSL 47.66□□□□□ -1.186e-7■■■■□ 22.7
SUB1P53999 PHB-207ENST00000506273 431 ntTSL 57.64□□□□□ -1.196e-7■■■■□ 22.7
SUB1P53999 PHB-205ENST00000446735 732 ntTSL 57.46□□□□□ -1.226e-7■■■■□ 22.7
SUB1P53999 PHB-203ENST00000419140 907 ntTSL 57.08□□□□□ -1.286e-7■■■■□ 22.7
SUB1P53999 ACSM3-206ENST00000561795 580 ntTSL 43.27□□□□□ -1.898e-13■■■■□ 22.7
SUB1P53999 DYNC1I2-218ENST00000452242 980 ntTSL 59.55□□□□□ -0.881e-6■■■■□ 22.7
SUB1P53999 DYNC1I2-221ENST00000471482 581 ntTSL 28.82□□□□□ -11e-6■■■■□ 22.7
SUB1P53999 DYNC1I2-215ENST00000438879 808 ntTSL 58.82□□□□□ -11e-6■■■■□ 22.7
SUB1P53999 EGFL7-205ENST00000490469 456 ntTSL 512.94□□□□□ -0.341e-6■■■■□ 22.7
SUB1P53999 FDFT1-207ENST00000525607 1773 ntTSL 214.64□□□□□ -0.071e-13■■■■□ 22.7
SUB1P53999 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC9.4□□□□□ -0.91e-13■■■■□ 22.7
SUB1P53999 IPO5-208ENST00000469360 3505 ntTSL 27□□□□□ -1.292e-23■■■■□ 22.6
SUB1P53999 CCT6A-209ENST00000494736 411 ntTSL 24.35□□□□□ -1.717e-29■■■■□ 22.6
SUB1P53999 NDUFB5-205ENST00000472629 744 ntTSL 3 BASIC8.87□□□□□ -0.991e-8■■■■□ 22.6
SUB1P53999 PLEKHJ1-210ENST00000588633 379 ntTSL 512.85□□□□□ -0.351e-26■■■■□ 22.6
SUB1P53999 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.226e-13■■■■□ 22.6
SUB1P53999 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.836e-13■■■■□ 22.6
SUB1P53999 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.866e-13■■■■□ 22.6
SUB1P53999 VPS35-210ENST00000568784 4017 ntTSL 1 (best)11.8□□□□□ -0.524e-9■■■■□ 22.6
SUB1P53999 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.571e-6■■■■□ 22.5
SUB1P53999 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.295e-9■■■■□ 22.5
SUB1P53999 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.882e-16■■■■□ 22.5
SUB1P53999 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.52■□□□□ 0.882e-16■■■■□ 22.5
SUB1P53999 EPCAM-203ENST00000419334 609 ntTSL 313.52□□□□□ -0.251e-8■■■■□ 22.5
SUB1P53999 KMT2B-202ENST00000585476 2864 ntTSL 1 (best)12.28□□□□□ -0.443e-6■■■■□ 22.5
SUB1P53999 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.461e-8■■■■□ 22.5
SUB1P53999 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.511e-8■■■■□ 22.5
SUB1P53999 SUGP2-204ENST00000593795 747 ntTSL 510.26□□□□□ -0.771e-8■■■■□ 22.5
SUB1P53999 EPCAM-205ENST00000474691 714 ntTSL 510.09□□□□□ -0.791e-8■■■■□ 22.5
SUB1P53999 KMT2B-203ENST00000586308 705 ntTSL 29.24□□□□□ -0.933e-6■■■■□ 22.5
SUB1P53999 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.063e-6■■■■□ 22.5
SUB1P53999 SUGP2-206ENST00000594773 4169 ntTSL 28.11□□□□□ -1.111e-8■■■■□ 22.5
SUB1P53999 SUGP2-201ENST00000330854 3629 ntTSL 1 (best)7.69□□□□□ -1.181e-8■■■■□ 22.5
SUB1P53999 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.233e-6■■■■□ 22.5
SUB1P53999 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC7.23□□□□□ -1.251e-8■■■■□ 22.5
SUB1P53999 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.283e-6■■■■□ 22.5
SUB1P53999 SUGP2-207ENST00000597095 536 ntTSL 26.72□□□□□ -1.331e-8■■■■□ 22.5
SUB1P53999 SUGP2-208ENST00000597163 423 ntTSL 32□□□□□ -2.091e-8■■■■□ 22.5
SUB1P53999 UBR4-217ENST00000497018 183 ntTSL 31.5□□□□□ -2.171e-7■■■■□ 22.5
SUB1P53999 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.56□□□□□ -1.524e-8■■■■□ 22.5
Retrieved 100 of 11,644 protein–RNA pairs in 140.8 ms