Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LIMK2P53671 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LIMK2P53671 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.89■□□□□ 0.94
LIMK2P53671 PLK5-205ENST00000642079 1969 ntBASIC20.89■□□□□ 0.93
LIMK2P53671 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LIMK2P53671 ID1-201ENST00000376105 1233 ntBASIC20.89■□□□□ 0.93
LIMK2P53671 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.89■□□□□ 0.93
LIMK2P53671 KRT19P1-201ENST00000405746 1186 ntBASIC20.89■□□□□ 0.93
LIMK2P53671 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.89■□□□□ 0.93
LIMK2P53671 AC080038.1-201ENST00000611274 1154 ntBASIC20.89■□□□□ 0.93
LIMK2P53671 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.89■□□□□ 0.93
LIMK2P53671 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LIMK2P53671 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LIMK2P53671 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LIMK2P53671 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
LIMK2P53671 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.89■□□□□ 0.93
LIMK2P53671 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LIMK2P53671 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.89■□□□□ 0.93
LIMK2P53671 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.88■□□□□ 0.93
LIMK2P53671 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.88■□□□□ 0.93
LIMK2P53671 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LIMK2P53671 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
LIMK2P53671 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.88■□□□□ 0.93
LIMK2P53671 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.88■□□□□ 0.93
LIMK2P53671 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.88■□□□□ 0.93
LIMK2P53671 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.88■□□□□ 0.93
LIMK2P53671 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.88■□□□□ 0.93
LIMK2P53671 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.88■□□□□ 0.93
LIMK2P53671 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LIMK2P53671 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LIMK2P53671 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LIMK2P53671 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LIMK2P53671 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.87■□□□□ 0.93
LIMK2P53671 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.87■□□□□ 0.93
LIMK2P53671 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LIMK2P53671 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.87■□□□□ 0.93
LIMK2P53671 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.87■□□□□ 0.93
LIMK2P53671 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.87■□□□□ 0.93
LIMK2P53671 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LIMK2P53671 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.86■□□□□ 0.93
LIMK2P53671 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LIMK2P53671 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LIMK2P53671 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LIMK2P53671 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LIMK2P53671 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIMK2P53671 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.86■□□□□ 0.93
LIMK2P53671 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LIMK2P53671 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.86■□□□□ 0.93
LIMK2P53671 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.86■□□□□ 0.93
LIMK2P53671 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIMK2P53671 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LIMK2P53671 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIMK2P53671 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
LIMK2P53671 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
LIMK2P53671 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LIMK2P53671 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIMK2P53671 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LIMK2P53671 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LIMK2P53671 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LIMK2P53671 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LIMK2P53671 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LIMK2P53671 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LIMK2P53671 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
LIMK2P53671 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LIMK2P53671 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
LIMK2P53671 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LIMK2P53671 AC079140.4-201ENST00000507448 529 ntBASIC20.85■□□□□ 0.93
LIMK2P53671 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.85■□□□□ 0.93
LIMK2P53671 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.85■□□□□ 0.93
LIMK2P53671 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LIMK2P53671 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.85■□□□□ 0.93
LIMK2P53671 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.85■□□□□ 0.93
LIMK2P53671 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LIMK2P53671 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LIMK2P53671 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK2P53671 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LIMK2P53671 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.84■□□□□ 0.93
LIMK2P53671 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK2P53671 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK2P53671 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK2P53671 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK2P53671 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms