Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCNN1AP37088 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.64■■□□□ 1.05
SCNN1AP37088 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.63■■□□□ 1.05
SCNN1AP37088 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
SCNN1AP37088 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.63■■□□□ 1.05
SCNN1AP37088 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 FAM21FP-204ENST00000608637 956 ntBASIC21.63■■□□□ 1.05
SCNN1AP37088 AC231657.2-201ENST00000624556 255 ntBASIC21.63■■□□□ 1.05
SCNN1AP37088 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.63■■□□□ 1.05
SCNN1AP37088 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.63■■□□□ 1.05
SCNN1AP37088 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.63■■□□□ 1.05
SCNN1AP37088 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCNN1AP37088 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SCNN1AP37088 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SCNN1AP37088 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.62■■□□□ 1.05
SCNN1AP37088 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
SCNN1AP37088 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCNN1AP37088 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SCNN1AP37088 IKBKGP1-201ENST00000612193 1073 ntBASIC21.61■■□□□ 1.05
SCNN1AP37088 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.61■■□□□ 1.05
SCNN1AP37088 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.61■■□□□ 1.05
SCNN1AP37088 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.61■■□□□ 1.05
SCNN1AP37088 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCNN1AP37088 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SCNN1AP37088 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.6■■□□□ 1.05
SCNN1AP37088 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SCNN1AP37088 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.6■■□□□ 1.05
SCNN1AP37088 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.6■■□□□ 1.05
SCNN1AP37088 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
SCNN1AP37088 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.6■■□□□ 1.05
SCNN1AP37088 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.6■■□□□ 1.05
SCNN1AP37088 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.6■■□□□ 1.05
SCNN1AP37088 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.6■■□□□ 1.05
SCNN1AP37088 AL137784.2-201ENST00000607332 1000 ntBASIC21.6■■□□□ 1.05
SCNN1AP37088 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SCNN1AP37088 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SCNN1AP37088 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.6■■□□□ 1.05
SCNN1AP37088 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCNN1AP37088 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.6■■□□□ 1.05
SCNN1AP37088 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SCNN1AP37088 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCNN1AP37088 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.59■■□□□ 1.05
SCNN1AP37088 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCNN1AP37088 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCNN1AP37088 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.59■■□□□ 1.05
SCNN1AP37088 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCNN1AP37088 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.59■■□□□ 1.05
SCNN1AP37088 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.59■■□□□ 1.05
SCNN1AP37088 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCNN1AP37088 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCNN1AP37088 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.59■■□□□ 1.05
SCNN1AP37088 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCNN1AP37088 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCNN1AP37088 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SCNN1AP37088 AC027702.1-201ENST00000563810 1770 ntBASIC21.59■■□□□ 1.05
SCNN1AP37088 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCNN1AP37088 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.58■■□□□ 1.05
SCNN1AP37088 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
SCNN1AP37088 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SCNN1AP37088 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms