Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A4P31645 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SLC6A4P31645 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A4P31645 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLC6A4P31645 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A4P31645 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLC6A4P31645 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.36■■□□□ 1.01
SLC6A4P31645 AC098934.4-201ENST00000564127 592 ntBASIC21.36■■□□□ 1.01
SLC6A4P31645 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.36■■□□□ 1.01
SLC6A4P31645 AC010980.2-201ENST00000587099 1412 ntBASIC21.36■■□□□ 1.01
SLC6A4P31645 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC6A4P31645 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A4P31645 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A4P31645 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC6A4P31645 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SLC6A4P31645 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC6A4P31645 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SLC6A4P31645 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 MIPEPP3-201ENST00000412105 444 ntBASIC21.35■■□□□ 1.01
SLC6A4P31645 CDV3P1-201ENST00000471403 739 ntBASIC21.35■■□□□ 1.01
SLC6A4P31645 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC6A4P31645 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC6A4P31645 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SLC6A4P31645 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A4P31645 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.34■■□□□ 1.01
SLC6A4P31645 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC6A4P31645 AC007322.3-201ENST00000426526 701 ntBASIC21.34■■□□□ 1.01
SLC6A4P31645 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC6A4P31645 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC6A4P31645 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC6A4P31645 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SLC6A4P31645 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC6A4P31645 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.33■■□□□ 1.01
SLC6A4P31645 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC6A4P31645 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A4P31645 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A4P31645 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A4P31645 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.33■■□□□ 1.01
SLC6A4P31645 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SLC6A4P31645 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.33■■□□□ 1.01
SLC6A4P31645 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SLC6A4P31645 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SLC6A4P31645 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.33■■□□□ 1
SLC6A4P31645 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
SLC6A4P31645 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC6A4P31645 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC6A4P31645 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.33■■□□□ 1
SLC6A4P31645 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A4P31645 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A4P31645 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A4P31645 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC6A4P31645 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC6A4P31645 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SLC6A4P31645 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.32■■□□□ 1
SLC6A4P31645 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.32■■□□□ 1
SLC6A4P31645 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.32■■□□□ 1
SLC6A4P31645 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.32■■□□□ 1
SLC6A4P31645 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC6A4P31645 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.32■■□□□ 1
SLC6A4P31645 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC6A4P31645 AC116050.2-201ENST00000612102 1779 ntBASIC21.32■■□□□ 1
SLC6A4P31645 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SLC6A4P31645 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.32■■□□□ 1
SLC6A4P31645 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A4P31645 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SLC6A4P31645 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A4P31645 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A4P31645 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC6A4P31645 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.31■■□□□ 1
SLC6A4P31645 BX276092.2-201ENST00000417668 665 ntBASIC21.31■■□□□ 1
SLC6A4P31645 AL355472.2-201ENST00000422958 438 ntBASIC21.31■■□□□ 1
SLC6A4P31645 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC6A4P31645 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.31■■□□□ 1
SLC6A4P31645 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SLC6A4P31645 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A4P31645 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A4P31645 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SLC6A4P31645 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC6A4P31645 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A4P31645 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC6A4P31645 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
SLC6A4P31645 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A4P31645 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms