Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA3P29320 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.15■□□□□ 0.82
EPHA3P29320 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.15■□□□□ 0.82
EPHA3P29320 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
EPHA3P29320 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
EPHA3P29320 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
EPHA3P29320 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.14■□□□□ 0.81
EPHA3P29320 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.14■□□□□ 0.81
EPHA3P29320 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
EPHA3P29320 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.14■□□□□ 0.81
EPHA3P29320 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.14■□□□□ 0.81
EPHA3P29320 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 AC055733.4-201ENST00000638462 1354 ntBASIC20.14■□□□□ 0.81
EPHA3P29320 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.14■□□□□ 0.81
EPHA3P29320 AL356441.2-201ENST00000443009 864 ntBASIC20.14■□□□□ 0.81
EPHA3P29320 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.14■□□□□ 0.81
EPHA3P29320 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.14■□□□□ 0.81
EPHA3P29320 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.14■□□□□ 0.81
EPHA3P29320 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA3P29320 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
EPHA3P29320 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
EPHA3P29320 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
EPHA3P29320 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.13■□□□□ 0.81
EPHA3P29320 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.13■□□□□ 0.81
EPHA3P29320 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 AL162377.1-201ENST00000618844 1793 ntBASIC20.13■□□□□ 0.81
EPHA3P29320 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA3P29320 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHA3P29320 AC009237.3-201ENST00000393279 1427 ntBASIC20.12■□□□□ 0.81
EPHA3P29320 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
EPHA3P29320 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
EPHA3P29320 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHA3P29320 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHA3P29320 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.12■□□□□ 0.81
EPHA3P29320 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHA3P29320 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
EPHA3P29320 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHA3P29320 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA3P29320 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.11■□□□□ 0.81
EPHA3P29320 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
EPHA3P29320 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
EPHA3P29320 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 BX842568.3-201ENST00000418104 571 ntBASIC20.11■□□□□ 0.81
EPHA3P29320 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 AC131281.2-201ENST00000520478 145 ntBASIC20.11■□□□□ 0.81
EPHA3P29320 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
EPHA3P29320 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.11■□□□□ 0.81
EPHA3P29320 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.11■□□□□ 0.81
EPHA3P29320 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.11■□□□□ 0.81
EPHA3P29320 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA3P29320 BX005040.4-201ENST00000637145 1518 ntBASIC20.11■□□□□ 0.81
EPHA3P29320 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHA3P29320 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHA3P29320 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHA3P29320 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHA3P29320 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.1■□□□□ 0.81
EPHA3P29320 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHA3P29320 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.1■□□□□ 0.81
EPHA3P29320 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
EPHA3P29320 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms